Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Mre11Q61216 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Mre11Q61216 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Mre11Q61216 Gm13158-201ENSMUST00000122007 736 ntBASIC19.05■□□□□ 0.64
Mre11Q61216 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.05■□□□□ 0.64
Mre11Q61216 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.05■□□□□ 0.64
Mre11Q61216 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.05■□□□□ 0.64
Mre11Q61216 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Mre11Q61216 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mre11Q61216 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Mre11Q61216 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
Mre11Q61216 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Mre11Q61216 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.04■□□□□ 0.64
Mre11Q61216 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.04■□□□□ 0.64
Mre11Q61216 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.04■□□□□ 0.64
Mre11Q61216 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Mre11Q61216 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Mre11Q61216 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mre11Q61216 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Mre11Q61216 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Mre11Q61216 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mre11Q61216 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mre11Q61216 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.03■□□□□ 0.64
Mre11Q61216 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.03■□□□□ 0.64
Mre11Q61216 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.03■□□□□ 0.64
Mre11Q61216 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Mre11Q61216 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Mre11Q61216 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mre11Q61216 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mre11Q61216 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.03■□□□□ 0.64
Mre11Q61216 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mre11Q61216 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Mre11Q61216 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC19.03■□□□□ 0.64
Mre11Q61216 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mre11Q61216 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
Mre11Q61216 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mre11Q61216 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Mre11Q61216 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.02■□□□□ 0.64
Mre11Q61216 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Mre11Q61216 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mre11Q61216 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mre11Q61216 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mre11Q61216 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mre11Q61216 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.02■□□□□ 0.64
Mre11Q61216 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Mre11Q61216 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mre11Q61216 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mre11Q61216 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Mre11Q61216 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mre11Q61216 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mre11Q61216 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mre11Q61216 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Mre11Q61216 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Mre11Q61216 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Mre11Q61216 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Mre11Q61216 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Mre11Q61216 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Mre11Q61216 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Mre11Q61216 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Mre11Q61216 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 Gm44291-201ENSMUST00000203102 2865 ntBASIC19.01■□□□□ 0.63
Mre11Q61216 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mre11Q61216 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms