Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.31■□□□□ 0.36
Cln3Q61124 Mir1895-201ENSMUST00000122615 79 ntBASIC17.31■□□□□ 0.36
Cln3Q61124 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.31■□□□□ 0.36
Cln3Q61124 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cln3Q61124 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cln3Q61124 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln3Q61124 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cln3Q61124 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.3■□□□□ 0.36
Cln3Q61124 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln3Q61124 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cln3Q61124 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.3■□□□□ 0.36
Cln3Q61124 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.3■□□□□ 0.36
Cln3Q61124 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cln3Q61124 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.3■□□□□ 0.36
Cln3Q61124 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cln3Q61124 Gm18246-201ENSMUST00000221023 728 ntBASIC17.3■□□□□ 0.36
Cln3Q61124 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln3Q61124 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln3Q61124 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cln3Q61124 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln3Q61124 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Cln3Q61124 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln3Q61124 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cln3Q61124 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln3Q61124 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cln3Q61124 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln3Q61124 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln3Q61124 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.29■□□□□ 0.36
Cln3Q61124 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.29■□□□□ 0.36
Cln3Q61124 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln3Q61124 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cln3Q61124 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cln3Q61124 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.29■□□□□ 0.36
Cln3Q61124 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cln3Q61124 Mir6956-201ENSMUST00000183598 62 ntBASIC17.29■□□□□ 0.36
Cln3Q61124 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.29■□□□□ 0.36
Cln3Q61124 Gm20553-201ENSMUST00000204205 844 ntBASIC17.29■□□□□ 0.36
Cln3Q61124 Gm45612-201ENSMUST00000211320 160 ntBASIC17.29■□□□□ 0.36
Cln3Q61124 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln3Q61124 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln3Q61124 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln3Q61124 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln3Q61124 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cln3Q61124 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cln3Q61124 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cln3Q61124 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cln3Q61124 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cln3Q61124 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cln3Q61124 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Gm44335-201ENSMUST00000196879 141 ntBASIC17.28■□□□□ 0.36
Cln3Q61124 Gm44297-201ENSMUST00000198304 141 ntBASIC17.28■□□□□ 0.36
Cln3Q61124 Gm44346-201ENSMUST00000198851 141 ntBASIC17.28■□□□□ 0.36
Cln3Q61124 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.28■□□□□ 0.36
Cln3Q61124 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.28■□□□□ 0.36
Cln3Q61124 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Cln3Q61124 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cln3Q61124 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cln3Q61124 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln3Q61124 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln3Q61124 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln3Q61124 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cln3Q61124 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cln3Q61124 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln3Q61124 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln3Q61124 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Cln3Q61124 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cln3Q61124 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln3Q61124 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cln3Q61124 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln3Q61124 Gm13616-201ENSMUST00000120600 222 ntBASIC17.27■□□□□ 0.36
Cln3Q61124 Gm11745-201ENSMUST00000121669 448 ntBASIC17.27■□□□□ 0.36
Cln3Q61124 Gm27301-201ENSMUST00000184012 127 ntBASIC17.27■□□□□ 0.36
Cln3Q61124 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.27■□□□□ 0.36
Cln3Q61124 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.27■□□□□ 0.36
Cln3Q61124 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln3Q61124 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln3Q61124 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln3Q61124 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms