Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Spg11Q3UHA3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Gm15198-201ENSMUST00000117283 177 ntBASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Gm12957-201ENSMUST00000117835 377 ntBASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Spg11Q3UHA3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gm11918-201ENSMUST00000121660 179 ntBASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gm18737-201ENSMUST00000173594 937 ntBASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gm42612-201ENSMUST00000197986 623 ntBASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gm43170-201ENSMUST00000199827 612 ntBASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.53□□□□□ -0.08
Spg11Q3UHA3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Spg11Q3UHA3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Gm10154-201ENSMUST00000084445 354 ntBASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Spg11Q3UHA3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Spg11Q3UHA3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Spg11Q3UHA3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms