Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pde6bP23440 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pde6bP23440 Gm15467-201ENSMUST00000120582 445 ntBASIC17.29■□□□□ 0.36
Pde6bP23440 Gm25925-201ENSMUST00000158314 306 ntBASIC17.29■□□□□ 0.36
Pde6bP23440 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.29■□□□□ 0.36
Pde6bP23440 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pde6bP23440 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pde6bP23440 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pde6bP23440 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.28■□□□□ 0.36
Pde6bP23440 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.28■□□□□ 0.36
Pde6bP23440 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.28■□□□□ 0.36
Pde6bP23440 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.28■□□□□ 0.36
Pde6bP23440 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pde6bP23440 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Pde6bP23440 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pde6bP23440 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Pde6bP23440 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pde6bP23440 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6bP23440 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Pde6bP23440 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pde6bP23440 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.27■□□□□ 0.36
Pde6bP23440 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6bP23440 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6bP23440 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6bP23440 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6bP23440 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pde6bP23440 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pde6bP23440 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6bP23440 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.27■□□□□ 0.36
Pde6bP23440 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.27■□□□□ 0.36
Pde6bP23440 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.27■□□□□ 0.36
Pde6bP23440 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6bP23440 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6bP23440 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6bP23440 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6bP23440 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pde6bP23440 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pde6bP23440 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pde6bP23440 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pde6bP23440 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pde6bP23440 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pde6bP23440 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pde6bP23440 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pde6bP23440 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pde6bP23440 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pde6bP23440 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.26■□□□□ 0.35
Pde6bP23440 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6bP23440 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6bP23440 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6bP23440 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6bP23440 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6bP23440 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6bP23440 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6bP23440 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.26■□□□□ 0.35
Pde6bP23440 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.26■□□□□ 0.35
Pde6bP23440 Gm7222-201ENSMUST00000117512 906 ntBASIC17.26■□□□□ 0.35
Pde6bP23440 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6bP23440 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.26■□□□□ 0.35
Pde6bP23440 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.26■□□□□ 0.35
Pde6bP23440 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pde6bP23440 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6bP23440 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6bP23440 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6bP23440 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pde6bP23440 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms