Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.06□□□□□ -0.32
Sdc1P18828 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.06□□□□□ -0.32
Sdc1P18828 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.06□□□□□ -0.32
Sdc1P18828 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Sdc1P18828 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.06□□□□□ -0.32
Sdc1P18828 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sdc1P18828 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sdc1P18828 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.06□□□□□ -0.32
Sdc1P18828 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sdc1P18828 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sdc1P18828 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
Sdc1P18828 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sdc1P18828 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Sdc1P18828 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Sdc1P18828 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Sdc1P18828 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sdc1P18828 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.05□□□□□ -0.32
Sdc1P18828 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.05□□□□□ -0.32
Sdc1P18828 Gm6365-201ENSMUST00000054711 744 ntBASIC13.05□□□□□ -0.32
Sdc1P18828 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sdc1P18828 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sdc1P18828 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.05□□□□□ -0.32
Sdc1P18828 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.04□□□□□ -0.32
Sdc1P18828 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sdc1P18828 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Sdc1P18828 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sdc1P18828 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.04□□□□□ -0.32
Sdc1P18828 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.04□□□□□ -0.32
Sdc1P18828 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.04□□□□□ -0.32
Sdc1P18828 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sdc1P18828 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.04□□□□□ -0.32
Sdc1P18828 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sdc1P18828 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sdc1P18828 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sdc1P18828 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Sdc1P18828 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.04□□□□□ -0.32
Sdc1P18828 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.03□□□□□ -0.32
Sdc1P18828 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Sdc1P18828 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sdc1P18828 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sdc1P18828 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sdc1P18828 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sdc1P18828 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms