Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
P06320 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
P06320 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
P06320 Gm38577-201ENSMUST00000221531 4545 ntBASIC10.05□□□□□ -0.8
P06320 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
P06320 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC10.05□□□□□ -0.8
P06320 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Mir5133-201ENSMUST00000174955 77 ntBASIC10.05□□□□□ -0.8
P06320 Gm42545-201ENSMUST00000202755 922 ntBASIC10.05□□□□□ -0.8
P06320 AC163280.1-201ENSMUST00000228194 1100 ntBASIC10.05□□□□□ -0.8
P06320 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
P06320 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC10.05□□□□□ -0.8
P06320 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
P06320 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.05□□□□□ -0.8
P06320 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.05□□□□□ -0.8
P06320 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P06320 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
P06320 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC10.04□□□□□ -0.8
P06320 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC10.04□□□□□ -0.8
P06320 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
P06320 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.04□□□□□ -0.8
P06320 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.04□□□□□ -0.8
P06320 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
P06320 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
P06320 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
P06320 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P06320 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
P06320 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
P06320 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
P06320 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC10.03□□□□□ -0.8
P06320 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms