Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.72■□□□□ 0.75
RTN3O95197 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.72■□□□□ 0.75
RTN3O95197 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTN3O95197 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
RTN3O95197 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.72■□□□□ 0.75
RTN3O95197 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RTN3O95197 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RTN3O95197 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.71■□□□□ 0.75
RTN3O95197 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.71■□□□□ 0.75
RTN3O95197 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.71■□□□□ 0.75
RTN3O95197 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
RTN3O95197 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.71■□□□□ 0.75
RTN3O95197 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.71■□□□□ 0.75
RTN3O95197 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTN3O95197 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.71■□□□□ 0.75
RTN3O95197 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 LTB4R2-202ENST00000528054 3092 ntBASIC19.7■□□□□ 0.74
RTN3O95197 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RTN3O95197 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
RTN3O95197 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN3O95197 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN3O95197 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RTN3O95197 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.7■□□□□ 0.74
RTN3O95197 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RTN3O95197 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.7■□□□□ 0.74
RTN3O95197 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RTN3O95197 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.7■□□□□ 0.74
RTN3O95197 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.7■□□□□ 0.74
RTN3O95197 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.7■□□□□ 0.74
RTN3O95197 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTN3O95197 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN3O95197 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RTN3O95197 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN3O95197 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN3O95197 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RTN3O95197 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RTN3O95197 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RTN3O95197 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.69■□□□□ 0.74
RTN3O95197 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN3O95197 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN3O95197 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.69■□□□□ 0.74
RTN3O95197 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.69■□□□□ 0.74
RTN3O95197 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN3O95197 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN3O95197 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.69■□□□□ 0.74
RTN3O95197 GCSHP2-201ENST00000560971 527 ntBASIC19.69■□□□□ 0.74
RTN3O95197 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RTN3O95197 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
RTN3O95197 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RTN3O95197 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN3O95197 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN3O95197 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
RTN3O95197 AC005332.7-201ENST00000614046 2005 ntBASIC19.68■□□□□ 0.74
RTN3O95197 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN3O95197 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTN3O95197 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RTN3O95197 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RTN3O95197 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.68■□□□□ 0.74
RTN3O95197 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RTN3O95197 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.68■□□□□ 0.74
RTN3O95197 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.68■□□□□ 0.74
RTN3O95197 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.68■□□□□ 0.74
RTN3O95197 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RTN3O95197 MYC-208ENST00000641036 567 ntBASIC19.68■□□□□ 0.74
RTN3O95197 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.68■□□□□ 0.74
RTN3O95197 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RTN3O95197 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.68■□□□□ 0.74
RTN3O95197 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
RTN3O95197 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.68■□□□□ 0.74
RTN3O95197 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN3O95197 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN3O95197 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN3O95197 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.68■□□□□ 0.74
RTN3O95197 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTN3O95197 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms