Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.08□□□□□ -0.32
Brs3O54798 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Brs3O54798 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.08□□□□□ -0.32
Brs3O54798 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.08□□□□□ -0.32
Brs3O54798 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.08□□□□□ -0.32
Brs3O54798 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.08□□□□□ -0.32
Brs3O54798 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.08□□□□□ -0.32
Brs3O54798 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.08□□□□□ -0.32
Brs3O54798 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Brs3O54798 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Brs3O54798 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Brs3O54798 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Brs3O54798 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Brs3O54798 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Brs3O54798 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Brs3O54798 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.07□□□□□ -0.32
Brs3O54798 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.07□□□□□ -0.32
Brs3O54798 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.07□□□□□ -0.32
Brs3O54798 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Gm27867-201ENSMUST00000184778 125 ntBASIC13.07□□□□□ -0.32
Brs3O54798 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.07□□□□□ -0.32
Brs3O54798 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Brs3O54798 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.07□□□□□ -0.32
Brs3O54798 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.07□□□□□ -0.32
Brs3O54798 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.07□□□□□ -0.32
Brs3O54798 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Brs3O54798 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.07□□□□□ -0.32
Brs3O54798 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brs3O54798 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.06□□□□□ -0.32
Brs3O54798 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.06□□□□□ -0.32
Brs3O54798 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.06□□□□□ -0.32
Brs3O54798 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.06□□□□□ -0.32
Brs3O54798 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Brs3O54798 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.06□□□□□ -0.32
Brs3O54798 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brs3O54798 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brs3O54798 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Brs3O54798 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brs3O54798 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brs3O54798 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brs3O54798 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brs3O54798 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Brs3O54798 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brs3O54798 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brs3O54798 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brs3O54798 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brs3O54798 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Brs3O54798 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Brs3O54798 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Brs3O54798 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Brs3O54798 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.05□□□□□ -0.32
Brs3O54798 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms