Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Clcn6O35454 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Clcn6O35454 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.1■□□□□ 0.33
Clcn6O35454 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Clcn6O35454 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Clcn6O35454 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.09■□□□□ 0.33
Clcn6O35454 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.09■□□□□ 0.33
Clcn6O35454 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Gm21394-202ENSMUST00000189463 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Gm20806-202ENSMUST00000190349 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.09■□□□□ 0.33
Clcn6O35454 Gm38027-201ENSMUST00000192315 235 ntBASIC17.09■□□□□ 0.33
Clcn6O35454 Gm2594-201ENSMUST00000214774 742 ntBASIC17.09■□□□□ 0.33
Clcn6O35454 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Clcn6O35454 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Clcn6O35454 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Clcn6O35454 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clcn6O35454 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn6O35454 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Clcn6O35454 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn6O35454 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn6O35454 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn6O35454 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn6O35454 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.08■□□□□ 0.33
Clcn6O35454 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clcn6O35454 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn6O35454 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn6O35454 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clcn6O35454 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn6O35454 Gm15565-201ENSMUST00000118890 427 ntBASIC17.08■□□□□ 0.32
Clcn6O35454 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Clcn6O35454 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn6O35454 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.08■□□□□ 0.32
Clcn6O35454 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Clcn6O35454 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clcn6O35454 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.08■□□□□ 0.32
Clcn6O35454 Timm23-208ENSMUST00000226683 750 ntBASIC17.08■□□□□ 0.32
Clcn6O35454 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn6O35454 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clcn6O35454 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn6O35454 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn6O35454 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn6O35454 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn6O35454 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn6O35454 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clcn6O35454 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Gm43771-201ENSMUST00000202931 1578 ntBASIC17.07■□□□□ 0.32
Clcn6O35454 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clcn6O35454 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.07■□□□□ 0.32
Clcn6O35454 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.07■□□□□ 0.32
Clcn6O35454 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC17.07■□□□□ 0.32
Clcn6O35454 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.07■□□□□ 0.32
Clcn6O35454 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Clcn6O35454 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clcn6O35454 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.07■□□□□ 0.32
Clcn6O35454 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Clcn6O35454 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms