Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm18063-201ENSMUST00000208529 568 ntBASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Gm18052-201ENSMUST00000208750 559 ntBASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Gm6973-201ENSMUST00000117080 721 ntBASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Gm43703-201ENSMUST00000200523 763 ntBASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a3E9PWQ3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a3E9PWQ3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a3E9PWQ3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.73■□□□□ 0.11
Col6a3E9PWQ3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a3E9PWQ3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a3E9PWQ3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.73■□□□□ 0.11
Col6a3E9PWQ3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a3E9PWQ3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a3E9PWQ3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a3E9PWQ3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col6a3E9PWQ3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Col6a3E9PWQ3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Col6a3E9PWQ3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Col6a3E9PWQ3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col6a3E9PWQ3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Gm18624-201ENSMUST00000220966 658 ntBASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col6a3E9PWQ3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms