Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Gm11249-201ENSMUST00000117071 859 ntBASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-3A0A0B4J1H2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm18115-201ENSMUST00000221209 621 ntBASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms