Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Gm11355-201ENSMUST00000121120 306 ntBASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5-4A0A075B652 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-4A0A075B652 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5-4A0A075B652 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Trav5-4A0A075B652 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5-4A0A075B652 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.27□□□□□ -0.28
Trav5-4A0A075B652 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms