Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Gm5874-201ENSMUST00000096101 508 ntBASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav8-1A0A075B641 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav8-1A0A075B641 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Trav8-1A0A075B641 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms