Protein–RNA interactions for Protein: Q9CZN4

Shisa9, Protein shisa-9, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa9Q9CZN4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Gm12644-201ENSMUST00000119935 606 ntBASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Gm34391-201ENSMUST00000203706 907 ntBASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa9Q9CZN4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Gm24589-201ENSMUST00000116692 94 ntBASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa9Q9CZN4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Shisa9Q9CZN4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Shisa9Q9CZN4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Shisa9Q9CZN4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Gm25406-201ENSMUST00000157599 105 ntBASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa9Q9CZN4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms