Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx6-1Q99MA9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Gm5312-201ENSMUST00000203728 547 ntBASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Nkx6-1Q99MA9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Gm44335-201ENSMUST00000196879 141 ntBASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Gm44297-201ENSMUST00000198304 141 ntBASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Gm44346-201ENSMUST00000198851 141 ntBASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Nkx6-1Q99MA9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Nkx6-1Q99MA9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx6-1Q99MA9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx6-1Q99MA9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Gm8344-201ENSMUST00000119813 856 ntBASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms