Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Grk6-207ENSMUST00000225925 2769 ntBASIC19.55■□□□□ 0.72
RtcbQ99LF4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Gm43125-201ENSMUST00000201724 730 ntBASIC19.55■□□□□ 0.72
RtcbQ99LF4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.55■□□□□ 0.72
RtcbQ99LF4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RtcbQ99LF4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.54■□□□□ 0.72
RtcbQ99LF4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Gm18246-201ENSMUST00000221023 728 ntBASIC19.54■□□□□ 0.72
RtcbQ99LF4 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.54■□□□□ 0.72
RtcbQ99LF4 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.54■□□□□ 0.72
RtcbQ99LF4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RtcbQ99LF4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Gm22175-201ENSMUST00000175007 78 ntBASIC19.53■□□□□ 0.72
RtcbQ99LF4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RtcbQ99LF4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RtcbQ99LF4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RtcbQ99LF4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RtcbQ99LF4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RtcbQ99LF4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.51■□□□□ 0.71
RtcbQ99LF4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.51■□□□□ 0.71
RtcbQ99LF4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RtcbQ99LF4 Mir449b-201ENSMUST00000104833 80 ntBASIC19.51■□□□□ 0.71
RtcbQ99LF4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms