Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RTL9Q8NET4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 BX276092.5-203ENST00000456199 560 ntBASIC23.08■■□□□ 1.29
RTL9Q8NET4 KRT18P41-201ENST00000518924 1277 ntBASIC23.08■■□□□ 1.29
RTL9Q8NET4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTL9Q8NET4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RTL9Q8NET4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RTL9Q8NET4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
RTL9Q8NET4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC23.07■■□□□ 1.28
RTL9Q8NET4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RTL9Q8NET4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RTL9Q8NET4 HEIH-201ENST00000623091 1652 ntBASIC23.07■■□□□ 1.28
RTL9Q8NET4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL9Q8NET4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL9Q8NET4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL9Q8NET4 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.07■■□□□ 1.28
RTL9Q8NET4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.07■■□□□ 1.28
RTL9Q8NET4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL9Q8NET4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL9Q8NET4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL9Q8NET4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL9Q8NET4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RTL9Q8NET4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.07■■□□□ 1.28
RTL9Q8NET4 RN7SL510P-201ENST00000581311 263 ntBASIC23.07■■□□□ 1.28
RTL9Q8NET4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
RTL9Q8NET4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.07■■□□□ 1.28
RTL9Q8NET4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL9Q8NET4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RTL9Q8NET4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.07■■□□□ 1.28
RTL9Q8NET4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.07■■□□□ 1.28
RTL9Q8NET4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL9Q8NET4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTL9Q8NET4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RTL9Q8NET4 AL032819.2-201ENST00000624543 2162 ntBASIC23.06■■□□□ 1.28
RTL9Q8NET4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.06■■□□□ 1.28
RTL9Q8NET4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTL9Q8NET4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.06■■□□□ 1.28
RTL9Q8NET4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.06■■□□□ 1.28
RTL9Q8NET4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.06■■□□□ 1.28
RTL9Q8NET4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.06■■□□□ 1.28
RTL9Q8NET4 RNF126P1-202ENST00000569893 925 ntBASIC23.06■■□□□ 1.28
RTL9Q8NET4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RTL9Q8NET4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.06■■□□□ 1.28
RTL9Q8NET4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RTL9Q8NET4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.06■■□□□ 1.28
RTL9Q8NET4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTL9Q8NET4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.06■■□□□ 1.28
RTL9Q8NET4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.06■■□□□ 1.28
RTL9Q8NET4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTL9Q8NET4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTL9Q8NET4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 CHCHD2P8-201ENST00000429873 447 ntBASIC23.05■■□□□ 1.28
RTL9Q8NET4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RTL9Q8NET4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTL9Q8NET4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTL9Q8NET4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 MTMR9LP-203ENST00000426597 1545 ntBASIC23.05■■□□□ 1.28
RTL9Q8NET4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTL9Q8NET4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTL9Q8NET4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.05■■□□□ 1.28
RTL9Q8NET4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTL9Q8NET4 Z98044.1-201ENST00000632503 1764 ntBASIC23.05■■□□□ 1.28
RTL9Q8NET4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTL9Q8NET4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
RTL9Q8NET4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTL9Q8NET4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTL9Q8NET4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RTL9Q8NET4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.04■■□□□ 1.28
RTL9Q8NET4 MIR3652-201ENST00000579335 131 ntBASIC23.04■■□□□ 1.28
RTL9Q8NET4 AC092329.2-201ENST00000598402 547 ntBASIC23.04■■□□□ 1.28
RTL9Q8NET4 AC093484.2-201ENST00000580996 2166 ntBASIC23.04■■□□□ 1.28
RTL9Q8NET4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.04■■□□□ 1.28
RTL9Q8NET4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RTL9Q8NET4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.04■■□□□ 1.28
RTL9Q8NET4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RTL9Q8NET4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RTL9Q8NET4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms