Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim72Q1XH17 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim72Q1XH17 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim72Q1XH17 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim72Q1XH17 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim72Q1XH17 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim72Q1XH17 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim72Q1XH17 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim72Q1XH17 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim72Q1XH17 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trim72Q1XH17 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.94■□□□□ 0.3
Trim72Q1XH17 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim72Q1XH17 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim72Q1XH17 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trim72Q1XH17 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim72Q1XH17 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim72Q1XH17 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Gm7367-201ENSMUST00000057611 492 ntBASIC16.91■□□□□ 0.3
Trim72Q1XH17 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim72Q1XH17 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim72Q1XH17 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim72Q1XH17 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim72Q1XH17 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms