Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Sybu-209ENSMUST00000228639 4113 ntBASIC13.38□□□□□ -0.27
Npas1P97459 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Npas1P97459 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Npas1P97459 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.38□□□□□ -0.27
Npas1P97459 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.38□□□□□ -0.27
Npas1P97459 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.38□□□□□ -0.27
Npas1P97459 Gm20049-201ENSMUST00000219950 730 ntBASIC13.38□□□□□ -0.27
Npas1P97459 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.38□□□□□ -0.27
Npas1P97459 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Npas1P97459 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npas1P97459 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Npas1P97459 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Npas1P97459 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.37□□□□□ -0.27
Npas1P97459 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.37□□□□□ -0.27
Npas1P97459 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.37□□□□□ -0.27
Npas1P97459 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.37□□□□□ -0.27
Npas1P97459 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.37□□□□□ -0.27
Npas1P97459 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.37□□□□□ -0.27
Npas1P97459 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Npas1P97459 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npas1P97459 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.36□□□□□ -0.27
Npas1P97459 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Npas1P97459 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.36□□□□□ -0.27
Npas1P97459 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Npas1P97459 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Npas1P97459 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.36□□□□□ -0.27
Npas1P97459 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.36□□□□□ -0.27
Npas1P97459 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.36□□□□□ -0.27
Npas1P97459 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.36□□□□□ -0.27
Npas1P97459 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.36□□□□□ -0.27
Npas1P97459 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Npas1P97459 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Npas1P97459 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Npas1P97459 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Npas1P97459 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Npas1P97459 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Npas1P97459 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms