Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.58□□□□□ -0.08
Lsm3P62311 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.58□□□□□ -0.08
Lsm3P62311 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Lsm3P62311 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Lsm3P62311 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Lsm3P62311 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lsm3P62311 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lsm3P62311 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.57□□□□□ -0.08
Lsm3P62311 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.57□□□□□ -0.08
Lsm3P62311 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lsm3P62311 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Lsm3P62311 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lsm3P62311 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lsm3P62311 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.56□□□□□ -0.08
Lsm3P62311 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.56□□□□□ -0.08
Lsm3P62311 Gm24841-201ENSMUST00000158676 357 ntBASIC14.56□□□□□ -0.08
Lsm3P62311 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Lsm3P62311 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lsm3P62311 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Lsm3P62311 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.55□□□□□ -0.08
Lsm3P62311 Gm10033-202ENSMUST00000211874 928 ntBASIC14.55□□□□□ -0.08
Lsm3P62311 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.55□□□□□ -0.08
Lsm3P62311 Gm10493-201ENSMUST00000097270 612 ntBASIC14.55□□□□□ -0.08
Lsm3P62311 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Lsm3P62311 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.55□□□□□ -0.08
Lsm3P62311 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Lsm3P62311 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm3P62311 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lsm3P62311 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.54□□□□□ -0.08
Lsm3P62311 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm3P62311 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.54□□□□□ -0.08
Lsm3P62311 Gm17661-201ENSMUST00000170317 270 ntBASIC14.54□□□□□ -0.08
Lsm3P62311 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms