Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Gm28033-201ENSMUST00000184224 96 ntBASIC17.11■□□□□ 0.33
Nub1P54729 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.11■□□□□ 0.33
Nub1P54729 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nub1P54729 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nub1P54729 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nub1P54729 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.11■□□□□ 0.33
Nub1P54729 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nub1P54729 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Gm9103-201ENSMUST00000119371 405 ntBASIC17.1■□□□□ 0.33
Nub1P54729 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Nub1P54729 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Nub1P54729 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nub1P54729 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Nub1P54729 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.1■□□□□ 0.33
Nub1P54729 Mir6404-201ENSMUST00000183699 94 ntBASIC17.1■□□□□ 0.33
Nub1P54729 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.1■□□□□ 0.33
Nub1P54729 Gm44454-201ENSMUST00000198541 138 ntBASIC17.1■□□□□ 0.33
Nub1P54729 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.1■□□□□ 0.33
Nub1P54729 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.1■□□□□ 0.33
Nub1P54729 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nub1P54729 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nub1P54729 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nub1P54729 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Nub1P54729 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nub1P54729 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nub1P54729 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.09■□□□□ 0.33
Nub1P54729 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.09■□□□□ 0.33
Nub1P54729 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.09■□□□□ 0.33
Nub1P54729 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.09■□□□□ 0.33
Nub1P54729 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.09■□□□□ 0.33
Nub1P54729 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nub1P54729 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nub1P54729 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nub1P54729 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nub1P54729 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Nub1P54729 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nub1P54729 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nub1P54729 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nub1P54729 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nub1P54729 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nub1P54729 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nub1P54729 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nub1P54729 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nub1P54729 Gm12895-201ENSMUST00000122214 226 ntBASIC17.08■□□□□ 0.32
Nub1P54729 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.08■□□□□ 0.32
Nub1P54729 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.08■□□□□ 0.32
Nub1P54729 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.08■□□□□ 0.32
Nub1P54729 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.08■□□□□ 0.32
Nub1P54729 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.08■□□□□ 0.32
Nub1P54729 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nub1P54729 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nub1P54729 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nub1P54729 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nub1P54729 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.07■□□□□ 0.32
Nub1P54729 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nub1P54729 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms