Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thbs1P35441 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.69□□□□□ -0.06
Thbs1P35441 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Thbs1P35441 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Thbs1P35441 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.69□□□□□ -0.06
Thbs1P35441 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thbs1P35441 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thbs1P35441 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thbs1P35441 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thbs1P35441 Gm6257-201ENSMUST00000163864 910 ntBASIC14.69□□□□□ -0.06
Thbs1P35441 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Thbs1P35441 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.69□□□□□ -0.06
Thbs1P35441 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Thbs1P35441 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.69□□□□□ -0.06
Thbs1P35441 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thbs1P35441 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thbs1P35441 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thbs1P35441 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Thbs1P35441 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Thbs1P35441 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.68□□□□□ -0.06
Thbs1P35441 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.68□□□□□ -0.06
Thbs1P35441 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.68□□□□□ -0.06
Thbs1P35441 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Thbs1P35441 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Thbs1P35441 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Thbs1P35441 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Thbs1P35441 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Thbs1P35441 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Thbs1P35441 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Gm13312-201ENSMUST00000119631 718 ntBASIC14.67□□□□□ -0.06
Thbs1P35441 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.67□□□□□ -0.06
Thbs1P35441 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.67□□□□□ -0.06
Thbs1P35441 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Thbs1P35441 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Thbs1P35441 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Thbs1P35441 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Thbs1P35441 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.66□□□□□ -0.06
Thbs1P35441 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.66□□□□□ -0.06
Thbs1P35441 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.66□□□□□ -0.06
Thbs1P35441 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Thbs1P35441 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms