Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.65□□□□□ -0.06
Cd40lgP27548 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Cd40lgP27548 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cd40lgP27548 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40lgP27548 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.65□□□□□ -0.06
Cd40lgP27548 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cd40lgP27548 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40lgP27548 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.63□□□□□ -0.07
Cd40lgP27548 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.63□□□□□ -0.07
Cd40lgP27548 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cd40lgP27548 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Cd40lgP27548 Gm15794-201ENSMUST00000120182 631 ntBASIC14.63□□□□□ -0.07
Cd40lgP27548 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.63□□□□□ -0.07
Cd40lgP27548 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.63□□□□□ -0.07
Cd40lgP27548 Rprl3-201ENSMUST00000157400 290 ntBASIC14.63□□□□□ -0.07
Cd40lgP27548 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.63□□□□□ -0.07
Cd40lgP27548 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.63□□□□□ -0.07
Cd40lgP27548 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Cd40lgP27548 Gm27357-201ENSMUST00000183754 135 ntBASIC14.63□□□□□ -0.07
Cd40lgP27548 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cd40lgP27548 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.63□□□□□ -0.07
Cd40lgP27548 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40lgP27548 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cd40lgP27548 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.62□□□□□ -0.07
Cd40lgP27548 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.62□□□□□ -0.07
Cd40lgP27548 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cd40lgP27548 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cd40lgP27548 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Cd40lgP27548 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.62□□□□□ -0.07
Cd40lgP27548 Olfr129-201ENSMUST00000122318 993 ntBASIC14.62□□□□□ -0.07
Cd40lgP27548 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.62□□□□□ -0.07
Cd40lgP27548 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.62□□□□□ -0.07
Cd40lgP27548 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.62□□□□□ -0.07
Cd40lgP27548 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cd40lgP27548 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.62□□□□□ -0.07
Cd40lgP27548 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.62□□□□□ -0.07
Cd40lgP27548 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cd40lgP27548 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Cd40lgP27548 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.61□□□□□ -0.07
Cd40lgP27548 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cd40lgP27548 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms