Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4n-4A0A075B615 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4n-4A0A075B615 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Gm10138-203ENSMUST00000206952 366 ntBASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Gm44549-201ENSMUST00000208351 577 ntBASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4n-4A0A075B615 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Gm37025-201ENSMUST00000195159 829 ntBASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Gm4974-201ENSMUST00000209974 875 ntBASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4n-4A0A075B615 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms