Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Htra1Q9R118 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Htra1Q9R118 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Htra1Q9R118 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Htra1Q9R118 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Htra1Q9R118 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Htra1Q9R118 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Htra1Q9R118 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Htra1Q9R118 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Htra1Q9R118 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Htra1Q9R118 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Htra1Q9R118 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Htra1Q9R118 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Htra1Q9R118 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Htra1Q9R118 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.02■□□□□ 0.95
Htra1Q9R118 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.01■□□□□ 0.95
Htra1Q9R118 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Htra1Q9R118 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Htra1Q9R118 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Htra1Q9R118 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Htra1Q9R118 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Htra1Q9R118 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Htra1Q9R118 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Htra1Q9R118 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.99■□□□□ 0.95
Htra1Q9R118 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.99■□□□□ 0.95
Htra1Q9R118 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Htra1Q9R118 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Htra1Q9R118 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Htra1Q9R118 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Htra1Q9R118 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Htra1Q9R118 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Htra1Q9R118 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Htra1Q9R118 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Htra1Q9R118 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Htra1Q9R118 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Htra1Q9R118 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.96■□□□□ 0.95
Htra1Q9R118 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.96■□□□□ 0.95
Htra1Q9R118 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Htra1Q9R118 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Htra1Q9R118 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Htra1Q9R118 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Htra1Q9R118 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Htra1Q9R118 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Htra1Q9R118 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Htra1Q9R118 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Htra1Q9R118 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Htra1Q9R118 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Htra1Q9R118 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Htra1Q9R118 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Htra1Q9R118 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Htra1Q9R118 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Htra1Q9R118 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Htra1Q9R118 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Htra1Q9R118 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Htra1Q9R118 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Htra1Q9R118 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Htra1Q9R118 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Htra1Q9R118 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Htra1Q9R118 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Htra1Q9R118 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Htra1Q9R118 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Htra1Q9R118 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Htra1Q9R118 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Htra1Q9R118 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Htra1Q9R118 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Htra1Q9R118 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Htra1Q9R118 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Htra1Q9R118 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Htra1Q9R118 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Htra1Q9R118 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Htra1Q9R118 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Htra1Q9R118 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Htra1Q9R118 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Htra1Q9R118 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Htra1Q9R118 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Htra1Q9R118 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.86■□□□□ 0.93
Htra1Q9R118 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Htra1Q9R118 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Htra1Q9R118 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Htra1Q9R118 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Htra1Q9R118 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.85■□□□□ 0.93
Htra1Q9R118 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Htra1Q9R118 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Htra1Q9R118 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Htra1Q9R118 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Htra1Q9R118 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Htra1Q9R118 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.84■□□□□ 0.93
Htra1Q9R118 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Htra1Q9R118 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Htra1Q9R118 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.83■□□□□ 0.93
Htra1Q9R118 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Htra1Q9R118 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Htra1Q9R118 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Htra1Q9R118 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Htra1Q9R118 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Htra1Q9R118 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Htra1Q9R118 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Htra1Q9R118 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Htra1Q9R118 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Htra1Q9R118 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms