Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RpgrQ9R0X5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RpgrQ9R0X5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RpgrQ9R0X5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RpgrQ9R0X5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.04■■□□□ 1.28
RpgrQ9R0X5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RpgrQ9R0X5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.04■■□□□ 1.28
RpgrQ9R0X5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RpgrQ9R0X5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RpgrQ9R0X5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RpgrQ9R0X5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RpgrQ9R0X5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RpgrQ9R0X5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.03■■□□□ 1.28
RpgrQ9R0X5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.03■■□□□ 1.28
RpgrQ9R0X5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RpgrQ9R0X5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RpgrQ9R0X5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RpgrQ9R0X5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RpgrQ9R0X5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RpgrQ9R0X5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RpgrQ9R0X5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RpgrQ9R0X5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RpgrQ9R0X5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RpgrQ9R0X5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
RpgrQ9R0X5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23■■□□□ 1.27
RpgrQ9R0X5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RpgrQ9R0X5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RpgrQ9R0X5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RpgrQ9R0X5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23■■□□□ 1.27
RpgrQ9R0X5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RpgrQ9R0X5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RpgrQ9R0X5 Particl-201ENSMUST00000205370 1560 ntBASIC22.99■■□□□ 1.27
RpgrQ9R0X5 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.99■■□□□ 1.27
RpgrQ9R0X5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RpgrQ9R0X5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RpgrQ9R0X5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RpgrQ9R0X5 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.97■■□□□ 1.27
RpgrQ9R0X5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RpgrQ9R0X5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RpgrQ9R0X5 Gm7432-201ENSMUST00000210343 879 ntBASIC22.97■■□□□ 1.27
RpgrQ9R0X5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RpgrQ9R0X5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RpgrQ9R0X5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
RpgrQ9R0X5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
RpgrQ9R0X5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RpgrQ9R0X5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
RpgrQ9R0X5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.95■■□□□ 1.26
RpgrQ9R0X5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RpgrQ9R0X5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
RpgrQ9R0X5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RpgrQ9R0X5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
RpgrQ9R0X5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RpgrQ9R0X5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RpgrQ9R0X5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RpgrQ9R0X5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RpgrQ9R0X5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RpgrQ9R0X5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.91■■□□□ 1.26
RpgrQ9R0X5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RpgrQ9R0X5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.91■■□□□ 1.26
RpgrQ9R0X5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.91■■□□□ 1.26
RpgrQ9R0X5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.91■■□□□ 1.26
RpgrQ9R0X5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
RpgrQ9R0X5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RpgrQ9R0X5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
RpgrQ9R0X5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RpgrQ9R0X5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RpgrQ9R0X5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RpgrQ9R0X5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RpgrQ9R0X5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
RpgrQ9R0X5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RpgrQ9R0X5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RpgrQ9R0X5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RpgrQ9R0X5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RpgrQ9R0X5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
RpgrQ9R0X5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.88■■□□□ 1.25
RpgrQ9R0X5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.88■■□□□ 1.25
RpgrQ9R0X5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RpgrQ9R0X5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RpgrQ9R0X5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RpgrQ9R0X5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RpgrQ9R0X5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RpgrQ9R0X5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
RpgrQ9R0X5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.86■■□□□ 1.25
RpgrQ9R0X5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RpgrQ9R0X5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RpgrQ9R0X5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RpgrQ9R0X5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RpgrQ9R0X5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RpgrQ9R0X5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RpgrQ9R0X5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RpgrQ9R0X5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RpgrQ9R0X5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RpgrQ9R0X5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
RpgrQ9R0X5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RpgrQ9R0X5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RpgrQ9R0X5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
RpgrQ9R0X5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RpgrQ9R0X5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
RpgrQ9R0X5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RpgrQ9R0X5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms