Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.17■□□□□ 0.82
Nubp2Q9R061 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nubp2Q9R061 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nubp2Q9R061 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nubp2Q9R061 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nubp2Q9R061 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nubp2Q9R061 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nubp2Q9R061 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nubp2Q9R061 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Nubp2Q9R061 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Nubp2Q9R061 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.14■□□□□ 0.81
Nubp2Q9R061 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nubp2Q9R061 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nubp2Q9R061 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Nubp2Q9R061 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nubp2Q9R061 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nubp2Q9R061 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nubp2Q9R061 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nubp2Q9R061 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.12■□□□□ 0.81
Nubp2Q9R061 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nubp2Q9R061 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nubp2Q9R061 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nubp2Q9R061 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nubp2Q9R061 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nubp2Q9R061 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nubp2Q9R061 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.1■□□□□ 0.81
Nubp2Q9R061 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nubp2Q9R061 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nubp2Q9R061 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nubp2Q9R061 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.09■□□□□ 0.81
Nubp2Q9R061 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nubp2Q9R061 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nubp2Q9R061 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Nubp2Q9R061 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nubp2Q9R061 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.08■□□□□ 0.8
Nubp2Q9R061 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nubp2Q9R061 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nubp2Q9R061 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nubp2Q9R061 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.07■□□□□ 0.8
Nubp2Q9R061 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nubp2Q9R061 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nubp2Q9R061 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nubp2Q9R061 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nubp2Q9R061 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nubp2Q9R061 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nubp2Q9R061 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nubp2Q9R061 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nubp2Q9R061 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.03■□□□□ 0.8
Nubp2Q9R061 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Nubp2Q9R061 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nubp2Q9R061 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nubp2Q9R061 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nubp2Q9R061 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nubp2Q9R061 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nubp2Q9R061 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nubp2Q9R061 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Nubp2Q9R061 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Nubp2Q9R061 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nubp2Q9R061 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nubp2Q9R061 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.99■□□□□ 0.79
Nubp2Q9R061 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms