Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.17■□□□□ 0.82
Nubp2Q9R061 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nubp2Q9R061 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nubp2Q9R061 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nubp2Q9R061 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nubp2Q9R061 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nubp2Q9R061 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nubp2Q9R061 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nubp2Q9R061 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Nubp2Q9R061 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Nubp2Q9R061 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.14■□□□□ 0.81
Nubp2Q9R061 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nubp2Q9R061 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nubp2Q9R061 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Nubp2Q9R061 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nubp2Q9R061 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nubp2Q9R061 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nubp2Q9R061 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nubp2Q9R061 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.12■□□□□ 0.81
Nubp2Q9R061 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nubp2Q9R061 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nubp2Q9R061 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nubp2Q9R061 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nubp2Q9R061 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nubp2Q9R061 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nubp2Q9R061 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.1■□□□□ 0.81
Nubp2Q9R061 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nubp2Q9R061 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nubp2Q9R061 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nubp2Q9R061 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.09■□□□□ 0.81
Nubp2Q9R061 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nubp2Q9R061 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nubp2Q9R061 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Nubp2Q9R061 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nubp2Q9R061 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.08■□□□□ 0.8
Nubp2Q9R061 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nubp2Q9R061 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nubp2Q9R061 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nubp2Q9R061 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.07■□□□□ 0.8
Nubp2Q9R061 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nubp2Q9R061 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nubp2Q9R061 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nubp2Q9R061 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nubp2Q9R061 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nubp2Q9R061 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nubp2Q9R061 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nubp2Q9R061 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp2Q9R061 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp2Q9R061 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nubp2Q9R061 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.03■□□□□ 0.8
Nubp2Q9R061 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nubp2Q9R061 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Nubp2Q9R061 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nubp2Q9R061 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nubp2Q9R061 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nubp2Q9R061 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nubp2Q9R061 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nubp2Q9R061 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nubp2Q9R061 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Nubp2Q9R061 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Nubp2Q9R061 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Nubp2Q9R061 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nubp2Q9R061 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nubp2Q9R061 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.99■□□□□ 0.79
Nubp2Q9R061 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nubp2Q9R061 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nubp2Q9R061 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms