Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20,03■□□□□ 0,8
Nubp1Q9R060 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20,03■□□□□ 0,8
Nubp1Q9R060 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20,02■□□□□ 0,8
Nubp1Q9R060 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20,02■□□□□ 0,8
Nubp1Q9R060 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20,02■□□□□ 0,79
Nubp1Q9R060 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20,01■□□□□ 0,79
Nubp1Q9R060 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20,01■□□□□ 0,79
Nubp1Q9R060 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20,01■□□□□ 0,79
Nubp1Q9R060 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20,01■□□□□ 0,79
Nubp1Q9R060 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0,79
Nubp1Q9R060 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20■□□□□ 0,79
Nubp1Q9R060 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20■□□□□ 0,79
Nubp1Q9R060 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0,79
Nubp1Q9R060 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20■□□□□ 0,79
Nubp1Q9R060 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19,99■□□□□ 0,79
Nubp1Q9R060 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19,99■□□□□ 0,79
Nubp1Q9R060 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19,99■□□□□ 0,79
Nubp1Q9R060 Rps24-207ENSMUST00000224568 714 ntBASIC19,98■□□□□ 0,79
Nubp1Q9R060 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19,98■□□□□ 0,79
Nubp1Q9R060 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19,98■□□□□ 0,79
Nubp1Q9R060 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19,98■□□□□ 0,79
Nubp1Q9R060 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19,98■□□□□ 0,79
Nubp1Q9R060 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19,98■□□□□ 0,79
Nubp1Q9R060 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19,98■□□□□ 0,79
Nubp1Q9R060 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19,97■□□□□ 0,79
Nubp1Q9R060 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19,97■□□□□ 0,79
Nubp1Q9R060 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19,97■□□□□ 0,79
Nubp1Q9R060 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19,97■□□□□ 0,79
Nubp1Q9R060 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19,97■□□□□ 0,79
Nubp1Q9R060 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19,96■□□□□ 0,79
Nubp1Q9R060 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19,96■□□□□ 0,79
Nubp1Q9R060 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19,96■□□□□ 0,79
Nubp1Q9R060 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19,96■□□□□ 0,79
Nubp1Q9R060 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19,96■□□□□ 0,79
Nubp1Q9R060 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19,95■□□□□ 0,78
Nubp1Q9R060 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19,95■□□□□ 0,78
Nubp1Q9R060 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19,95■□□□□ 0,78
Nubp1Q9R060 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19,94■□□□□ 0,78
Nubp1Q9R060 AC153911.1-201ENSMUST00000220378 758 ntBASIC19,94■□□□□ 0,78
Nubp1Q9R060 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19,94■□□□□ 0,78
Nubp1Q9R060 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19,94■□□□□ 0,78
Nubp1Q9R060 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19,93■□□□□ 0,78
Nubp1Q9R060 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19,93■□□□□ 0,78
Nubp1Q9R060 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19,93■□□□□ 0,78
Nubp1Q9R060 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19,92■□□□□ 0,78
Nubp1Q9R060 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19,92■□□□□ 0,78
Nubp1Q9R060 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19,92■□□□□ 0,78
Nubp1Q9R060 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19,92■□□□□ 0,78
Nubp1Q9R060 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19,92■□□□□ 0,78
Nubp1Q9R060 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19,92■□□□□ 0,78
Nubp1Q9R060 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19,92■□□□□ 0,78
Nubp1Q9R060 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19,91■□□□□ 0,78
Nubp1Q9R060 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19,91■□□□□ 0,78
Nubp1Q9R060 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19,9■□□□□ 0,78
Nubp1Q9R060 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19,9■□□□□ 0,78
Nubp1Q9R060 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19,89■□□□□ 0,77
Nubp1Q9R060 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19,89■□□□□ 0,77
Nubp1Q9R060 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19,89■□□□□ 0,77
Nubp1Q9R060 AC093043.1-201ENSMUST00000226700 898 ntBASIC19,89■□□□□ 0,77
Nubp1Q9R060 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19,88■□□□□ 0,77
Nubp1Q9R060 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19,88■□□□□ 0,77
Nubp1Q9R060 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19,88■□□□□ 0,77
Nubp1Q9R060 AC151971.4-201ENSMUST00000214717 704 ntBASIC19,88■□□□□ 0,77
Nubp1Q9R060 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19,88■□□□□ 0,77
Nubp1Q9R060 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19,87■□□□□ 0,77
Nubp1Q9R060 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19,87■□□□□ 0,77
Nubp1Q9R060 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19,87■□□□□ 0,77
Nubp1Q9R060 Gm45102-201ENSMUST00000207427 857 ntBASIC19,87■□□□□ 0,77
Nubp1Q9R060 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19,86■□□□□ 0,77
Nubp1Q9R060 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19,86■□□□□ 0,77
Nubp1Q9R060 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19,86■□□□□ 0,77
Nubp1Q9R060 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19,86■□□□□ 0,77
Nubp1Q9R060 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19,86■□□□□ 0,77
Nubp1Q9R060 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19,85■□□□□ 0,77
Nubp1Q9R060 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19,85■□□□□ 0,77
Nubp1Q9R060 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19,85■□□□□ 0,77
Nubp1Q9R060 Gm43566-201ENSMUST00000196851 808 ntBASIC19,85■□□□□ 0,77
Nubp1Q9R060 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19,85■□□□□ 0,77
Nubp1Q9R060 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19,85■□□□□ 0,77
Nubp1Q9R060 Amer2-203ENSMUST00000225247 2662 ntBASIC19,85■□□□□ 0,77
Nubp1Q9R060 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19,85■□□□□ 0,77
Nubp1Q9R060 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19,84■□□□□ 0,77
Nubp1Q9R060 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19,84■□□□□ 0,77
Nubp1Q9R060 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19,84■□□□□ 0,77
Nubp1Q9R060 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19,84■□□□□ 0,77
Nubp1Q9R060 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19,82■□□□□ 0,76
Nubp1Q9R060 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19,82■□□□□ 0,76
Nubp1Q9R060 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19,82■□□□□ 0,76
Nubp1Q9R060 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19,82■□□□□ 0,76
Nubp1Q9R060 Terc-201ENSMUST00000082862 423 ntBASIC19,82■□□□□ 0,76
Nubp1Q9R060 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19,82■□□□□ 0,76
Nubp1Q9R060 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19,82■□□□□ 0,76
Nubp1Q9R060 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19,82■□□□□ 0,76
Nubp1Q9R060 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19,81■□□□□ 0,76
Nubp1Q9R060 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19,81■□□□□ 0,76
Nubp1Q9R060 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19,81■□□□□ 0,76
Nubp1Q9R060 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19,81■□□□□ 0,76
Nubp1Q9R060 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19,81■□□□□ 0,76
Nubp1Q9R060 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19,81■□□□□ 0,76
Nubp1Q9R060 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19,81■□□□□ 0,76
Retrieved 100 of 76,532 protein–RNA pairs in 12,8 ms