Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.04■□□□□ 0.8
Mbd3l1Q9D9H3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mbd3l1Q9D9H3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mbd3l1Q9D9H3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mbd3l1Q9D9H3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mbd3l1Q9D9H3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mbd3l1Q9D9H3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mbd3l1Q9D9H3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mbd3l1Q9D9H3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mbd3l1Q9D9H3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mbd3l1Q9D9H3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mbd3l1Q9D9H3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mbd3l1Q9D9H3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mbd3l1Q9D9H3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Mbd3l1Q9D9H3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20■□□□□ 0.79
Mbd3l1Q9D9H3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
Mbd3l1Q9D9H3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Mbd3l1Q9D9H3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mbd3l1Q9D9H3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mbd3l1Q9D9H3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mbd3l1Q9D9H3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mbd3l1Q9D9H3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mbd3l1Q9D9H3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mbd3l1Q9D9H3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Mbd3l1Q9D9H3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mbd3l1Q9D9H3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mbd3l1Q9D9H3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mbd3l1Q9D9H3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mbd3l1Q9D9H3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Mbd3l1Q9D9H3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mbd3l1Q9D9H3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mbd3l1Q9D9H3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mbd3l1Q9D9H3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.95■□□□□ 0.78
Mbd3l1Q9D9H3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mbd3l1Q9D9H3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Mbd3l1Q9D9H3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Mbd3l1Q9D9H3 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.94■□□□□ 0.78
Mbd3l1Q9D9H3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Mbd3l1Q9D9H3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.93■□□□□ 0.78
Mbd3l1Q9D9H3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mbd3l1Q9D9H3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Mbd3l1Q9D9H3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mbd3l1Q9D9H3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mbd3l1Q9D9H3 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.92■□□□□ 0.78
Mbd3l1Q9D9H3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.91■□□□□ 0.78
Mbd3l1Q9D9H3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Mbd3l1Q9D9H3 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.91■□□□□ 0.78
Mbd3l1Q9D9H3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mbd3l1Q9D9H3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mbd3l1Q9D9H3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mbd3l1Q9D9H3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mbd3l1Q9D9H3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mbd3l1Q9D9H3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.78
Mbd3l1Q9D9H3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Mbd3l1Q9D9H3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mbd3l1Q9D9H3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd3l1Q9D9H3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Mbd3l1Q9D9H3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd3l1Q9D9H3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd3l1Q9D9H3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd3l1Q9D9H3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.88■□□□□ 0.77
Mbd3l1Q9D9H3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd3l1Q9D9H3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Mbd3l1Q9D9H3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mbd3l1Q9D9H3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mbd3l1Q9D9H3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mbd3l1Q9D9H3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Mbd3l1Q9D9H3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.87■□□□□ 0.77
Mbd3l1Q9D9H3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mbd3l1Q9D9H3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.87■□□□□ 0.77
Mbd3l1Q9D9H3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Mbd3l1Q9D9H3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mbd3l1Q9D9H3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mbd3l1Q9D9H3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mbd3l1Q9D9H3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Mbd3l1Q9D9H3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mbd3l1Q9D9H3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mbd3l1Q9D9H3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Mbd3l1Q9D9H3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Mbd3l1Q9D9H3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
Mbd3l1Q9D9H3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd3l1Q9D9H3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd3l1Q9D9H3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd3l1Q9D9H3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd3l1Q9D9H3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd3l1Q9D9H3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mbd3l1Q9D9H3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Mbd3l1Q9D9H3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Mbd3l1Q9D9H3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mbd3l1Q9D9H3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mbd3l1Q9D9H3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Mbd3l1Q9D9H3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Mbd3l1Q9D9H3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mbd3l1Q9D9H3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mbd3l1Q9D9H3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mbd3l1Q9D9H3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mbd3l1Q9D9H3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mbd3l1Q9D9H3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mbd3l1Q9D9H3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mbd3l1Q9D9H3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms