Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
U2af1Q9D883 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
U2af1Q9D883 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC30.42■■■□□ 2.46
U2af1Q9D883 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
U2af1Q9D883 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
U2af1Q9D883 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
U2af1Q9D883 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
U2af1Q9D883 Gm9812-201ENSMUST00000061934 968 ntBASIC30.41■■■□□ 2.46
U2af1Q9D883 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC30.41■■■□□ 2.46
U2af1Q9D883 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
U2af1Q9D883 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
U2af1Q9D883 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
U2af1Q9D883 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.4■■■□□ 2.46
U2af1Q9D883 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
U2af1Q9D883 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
U2af1Q9D883 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.39■■■□□ 2.46
U2af1Q9D883 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC30.38■■■□□ 2.45
U2af1Q9D883 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
U2af1Q9D883 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
U2af1Q9D883 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
U2af1Q9D883 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
U2af1Q9D883 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
U2af1Q9D883 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
U2af1Q9D883 AC122317.2-201ENSMUST00000218708 1248 ntBASIC30.36■■■□□ 2.45
U2af1Q9D883 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC30.36■■■□□ 2.45
U2af1Q9D883 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
U2af1Q9D883 Gm9806-201ENSMUST00000051080 552 ntBASIC30.35■■■□□ 2.45
U2af1Q9D883 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
U2af1Q9D883 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
U2af1Q9D883 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
U2af1Q9D883 Mir6538-201ENSMUST00000183713 110 ntBASIC30.34■■■□□ 2.45
U2af1Q9D883 Gm16437-201ENSMUST00000025669 507 ntBASIC30.34■■■□□ 2.45
U2af1Q9D883 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
U2af1Q9D883 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
U2af1Q9D883 Gm4419-202ENSMUST00000226239 1431 ntBASIC30.33■■■□□ 2.45
U2af1Q9D883 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
U2af1Q9D883 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
U2af1Q9D883 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
U2af1Q9D883 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
U2af1Q9D883 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30.3■■■□□ 2.44
U2af1Q9D883 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30.3■■■□□ 2.44
U2af1Q9D883 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
U2af1Q9D883 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
U2af1Q9D883 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
U2af1Q9D883 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
U2af1Q9D883 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
U2af1Q9D883 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
U2af1Q9D883 Gm11687-201ENSMUST00000118911 886 ntBASIC30.28■■■□□ 2.44
U2af1Q9D883 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
U2af1Q9D883 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
U2af1Q9D883 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
U2af1Q9D883 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
U2af1Q9D883 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
U2af1Q9D883 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
U2af1Q9D883 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
U2af1Q9D883 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
U2af1Q9D883 Gm9910-201ENSMUST00000195385 1550 ntBASIC30.22■■■□□ 2.43
U2af1Q9D883 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
U2af1Q9D883 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC30.21■■■□□ 2.43
U2af1Q9D883 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
U2af1Q9D883 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
U2af1Q9D883 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC30.21■■■□□ 2.43
U2af1Q9D883 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
U2af1Q9D883 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
U2af1Q9D883 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
U2af1Q9D883 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
U2af1Q9D883 AC153911.1-201ENSMUST00000220378 758 ntBASIC30.19■■■□□ 2.42
U2af1Q9D883 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
U2af1Q9D883 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
U2af1Q9D883 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
U2af1Q9D883 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
U2af1Q9D883 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
U2af1Q9D883 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
U2af1Q9D883 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
U2af1Q9D883 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC30.15■■■□□ 2.42
U2af1Q9D883 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
U2af1Q9D883 Terc-201ENSMUST00000082862 423 ntBASIC30.15■■■□□ 2.42
U2af1Q9D883 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC30.14■■■□□ 2.42
U2af1Q9D883 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC30.14■■■□□ 2.42
U2af1Q9D883 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
U2af1Q9D883 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
U2af1Q9D883 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
U2af1Q9D883 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
U2af1Q9D883 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
U2af1Q9D883 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
U2af1Q9D883 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
U2af1Q9D883 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
U2af1Q9D883 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
U2af1Q9D883 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
U2af1Q9D883 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
U2af1Q9D883 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
U2af1Q9D883 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
U2af1Q9D883 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
U2af1Q9D883 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
U2af1Q9D883 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
U2af1Q9D883 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
U2af1Q9D883 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC30.11■■■□□ 2.41
U2af1Q9D883 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC30.1■■■□□ 2.41
U2af1Q9D883 AC153890.1-201ENSMUST00000220021 2469 ntBASIC30.1■■■□□ 2.41
U2af1Q9D883 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms