Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Snrnp48Q9D361 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Snrnp48Q9D361 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Snrnp48Q9D361 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Snrnp48Q9D361 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Snrnp48Q9D361 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
Snrnp48Q9D361 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.9■■□□□ 1.26
Snrnp48Q9D361 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Snrnp48Q9D361 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Snrnp48Q9D361 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Snrnp48Q9D361 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Snrnp48Q9D361 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Snrnp48Q9D361 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.88■■□□□ 1.25
Snrnp48Q9D361 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Snrnp48Q9D361 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.88■■□□□ 1.25
Snrnp48Q9D361 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Snrnp48Q9D361 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Snrnp48Q9D361 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Snrnp48Q9D361 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Snrnp48Q9D361 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Snrnp48Q9D361 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.86■■□□□ 1.25
Snrnp48Q9D361 Gm4799-201ENSMUST00000095396 657 ntBASIC22.86■■□□□ 1.25
Snrnp48Q9D361 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Snrnp48Q9D361 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Snrnp48Q9D361 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.85■■□□□ 1.25
Snrnp48Q9D361 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.85■■□□□ 1.25
Snrnp48Q9D361 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Snrnp48Q9D361 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Snrnp48Q9D361 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Snrnp48Q9D361 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Snrnp48Q9D361 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Snrnp48Q9D361 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Snrnp48Q9D361 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Snrnp48Q9D361 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Snrnp48Q9D361 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Snrnp48Q9D361 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
Snrnp48Q9D361 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Snrnp48Q9D361 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Snrnp48Q9D361 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Snrnp48Q9D361 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Snrnp48Q9D361 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Snrnp48Q9D361 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Snrnp48Q9D361 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.81■■□□□ 1.24
Snrnp48Q9D361 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Snrnp48Q9D361 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Snrnp48Q9D361 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Snrnp48Q9D361 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.8■■□□□ 1.24
Snrnp48Q9D361 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Snrnp48Q9D361 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Snrnp48Q9D361 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.8■■□□□ 1.24
Snrnp48Q9D361 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Snrnp48Q9D361 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Snrnp48Q9D361 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Snrnp48Q9D361 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Snrnp48Q9D361 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Snrnp48Q9D361 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Snrnp48Q9D361 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Snrnp48Q9D361 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Snrnp48Q9D361 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Snrnp48Q9D361 Mir3960-201ENSMUST00000198213 73 ntBASIC22.77■■□□□ 1.24
Snrnp48Q9D361 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.77■■□□□ 1.24
Snrnp48Q9D361 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Snrnp48Q9D361 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.77■■□□□ 1.23
Snrnp48Q9D361 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Snrnp48Q9D361 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Snrnp48Q9D361 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Snrnp48Q9D361 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Snrnp48Q9D361 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Snrnp48Q9D361 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Snrnp48Q9D361 Gm9812-201ENSMUST00000061934 968 ntBASIC22.75■■□□□ 1.23
Snrnp48Q9D361 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Snrnp48Q9D361 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.74■■□□□ 1.23
Snrnp48Q9D361 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Snrnp48Q9D361 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Snrnp48Q9D361 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Snrnp48Q9D361 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.73■■□□□ 1.23
Snrnp48Q9D361 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Snrnp48Q9D361 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Snrnp48Q9D361 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Snrnp48Q9D361 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Snrnp48Q9D361 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.71■■□□□ 1.23
Snrnp48Q9D361 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Snrnp48Q9D361 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Snrnp48Q9D361 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Snrnp48Q9D361 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.7■■□□□ 1.22
Snrnp48Q9D361 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Snrnp48Q9D361 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Snrnp48Q9D361 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Snrnp48Q9D361 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Snrnp48Q9D361 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Snrnp48Q9D361 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Snrnp48Q9D361 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Snrnp48Q9D361 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Snrnp48Q9D361 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Snrnp48Q9D361 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.68■■□□□ 1.22
Snrnp48Q9D361 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Snrnp48Q9D361 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Snrnp48Q9D361 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.68■■□□□ 1.22
Snrnp48Q9D361 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Snrnp48Q9D361 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms