Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.88■■■□□ 2.21
Trim34aQ99PP6 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.88■■■□□ 2.21
Trim34aQ99PP6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC28.87■■■□□ 2.21
Trim34aQ99PP6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC28.87■■■□□ 2.21
Trim34aQ99PP6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Trim34aQ99PP6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Trim34aQ99PP6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.86■■■□□ 2.21
Trim34aQ99PP6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC28.86■■■□□ 2.21
Trim34aQ99PP6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Trim34aQ99PP6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Trim34aQ99PP6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim34aQ99PP6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.85■■■□□ 2.21
Trim34aQ99PP6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Trim34aQ99PP6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Trim34aQ99PP6 AC151971.4-201ENSMUST00000214717 704 ntBASIC28.82■■■□□ 2.2
Trim34aQ99PP6 Terc-201ENSMUST00000082862 423 ntBASIC28.82■■■□□ 2.2
Trim34aQ99PP6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Trim34aQ99PP6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
Trim34aQ99PP6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Trim34aQ99PP6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.8■■■□□ 2.2
Trim34aQ99PP6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Trim34aQ99PP6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Trim34aQ99PP6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Trim34aQ99PP6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC28.78■■■□□ 2.2
Trim34aQ99PP6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Trim34aQ99PP6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Trim34aQ99PP6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.77■■■□□ 2.2
Trim34aQ99PP6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Trim34aQ99PP6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Trim34aQ99PP6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Trim34aQ99PP6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
Trim34aQ99PP6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Trim34aQ99PP6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Trim34aQ99PP6 Gm5067-201ENSMUST00000170449 1009 ntBASIC28.76■■■□□ 2.19
Trim34aQ99PP6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Trim34aQ99PP6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Trim34aQ99PP6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
Trim34aQ99PP6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Trim34aQ99PP6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Trim34aQ99PP6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC28.75■■■□□ 2.19
Trim34aQ99PP6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
Trim34aQ99PP6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Trim34aQ99PP6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.74■■■□□ 2.19
Trim34aQ99PP6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28.74■■■□□ 2.19
Trim34aQ99PP6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Trim34aQ99PP6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Trim34aQ99PP6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Trim34aQ99PP6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Trim34aQ99PP6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Trim34aQ99PP6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Trim34aQ99PP6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Trim34aQ99PP6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Trim34aQ99PP6 Amer2-203ENSMUST00000225247 2662 ntBASIC28.7■■■□□ 2.19
Trim34aQ99PP6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Trim34aQ99PP6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Trim34aQ99PP6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.69■■■□□ 2.18
Trim34aQ99PP6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Trim34aQ99PP6 Gm10420-201ENSMUST00000121713 882 ntBASIC28.69■■■□□ 2.18
Trim34aQ99PP6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC28.69■■■□□ 2.18
Trim34aQ99PP6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
Trim34aQ99PP6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Trim34aQ99PP6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
Trim34aQ99PP6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
Trim34aQ99PP6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
Trim34aQ99PP6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC28.67■■■□□ 2.18
Trim34aQ99PP6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Trim34aQ99PP6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Trim34aQ99PP6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Trim34aQ99PP6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
Trim34aQ99PP6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Trim34aQ99PP6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Trim34aQ99PP6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Trim34aQ99PP6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Trim34aQ99PP6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Trim34aQ99PP6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
Trim34aQ99PP6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Trim34aQ99PP6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Trim34aQ99PP6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Trim34aQ99PP6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Trim34aQ99PP6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Trim34aQ99PP6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Trim34aQ99PP6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Trim34aQ99PP6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Trim34aQ99PP6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Trim34aQ99PP6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.6■■■□□ 2.17
Trim34aQ99PP6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC28.6■■■□□ 2.17
Trim34aQ99PP6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28.59■■■□□ 2.17
Trim34aQ99PP6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
Trim34aQ99PP6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.58■■■□□ 2.17
Trim34aQ99PP6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Trim34aQ99PP6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC28.56■■■□□ 2.16
Trim34aQ99PP6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Trim34aQ99PP6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Trim34aQ99PP6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Trim34aQ99PP6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
Trim34aQ99PP6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Trim34aQ99PP6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.54■■■□□ 2.16
Trim34aQ99PP6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Trim34aQ99PP6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Trim34aQ99PP6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms