Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdca3Q99M54 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdca3Q99M54 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdca3Q99M54 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdca3Q99M54 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdca3Q99M54 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.12■□□□□ 0.97
Cdca3Q99M54 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdca3Q99M54 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdca3Q99M54 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdca3Q99M54 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cdca3Q99M54 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cdca3Q99M54 Particl-201ENSMUST00000205370 1560 ntBASIC21.1■□□□□ 0.97
Cdca3Q99M54 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cdca3Q99M54 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdca3Q99M54 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdca3Q99M54 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdca3Q99M54 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdca3Q99M54 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdca3Q99M54 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdca3Q99M54 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cdca3Q99M54 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdca3Q99M54 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdca3Q99M54 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.08■□□□□ 0.96
Cdca3Q99M54 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.08■□□□□ 0.96
Cdca3Q99M54 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdca3Q99M54 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdca3Q99M54 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cdca3Q99M54 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdca3Q99M54 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdca3Q99M54 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.06■□□□□ 0.96
Cdca3Q99M54 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdca3Q99M54 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdca3Q99M54 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdca3Q99M54 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdca3Q99M54 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cdca3Q99M54 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdca3Q99M54 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdca3Q99M54 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdca3Q99M54 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdca3Q99M54 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.05■□□□□ 0.96
Cdca3Q99M54 Gm11687-201ENSMUST00000118911 886 ntBASIC21.05■□□□□ 0.96
Cdca3Q99M54 Scarna2-201ENSMUST00000157560 414 ntBASIC21.05■□□□□ 0.96
Cdca3Q99M54 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdca3Q99M54 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdca3Q99M54 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdca3Q99M54 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdca3Q99M54 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdca3Q99M54 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cdca3Q99M54 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cdca3Q99M54 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdca3Q99M54 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdca3Q99M54 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdca3Q99M54 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdca3Q99M54 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cdca3Q99M54 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cdca3Q99M54 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cdca3Q99M54 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdca3Q99M54 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cdca3Q99M54 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.02■□□□□ 0.96
Cdca3Q99M54 Gm30023-201ENSMUST00000197970 889 ntBASIC21.02■□□□□ 0.96
Cdca3Q99M54 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdca3Q99M54 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdca3Q99M54 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdca3Q99M54 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdca3Q99M54 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdca3Q99M54 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdca3Q99M54 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdca3Q99M54 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21■□□□□ 0.95
Cdca3Q99M54 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdca3Q99M54 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdca3Q99M54 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdca3Q99M54 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdca3Q99M54 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdca3Q99M54 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Cdca3Q99M54 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cdca3Q99M54 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdca3Q99M54 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdca3Q99M54 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
Cdca3Q99M54 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cdca3Q99M54 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.98■□□□□ 0.95
Cdca3Q99M54 Gm9806-201ENSMUST00000051080 552 ntBASIC20.98■□□□□ 0.95
Cdca3Q99M54 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cdca3Q99M54 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdca3Q99M54 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.97■□□□□ 0.95
Cdca3Q99M54 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.97■□□□□ 0.95
Cdca3Q99M54 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdca3Q99M54 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdca3Q99M54 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdca3Q99M54 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdca3Q99M54 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.97■□□□□ 0.95
Cdca3Q99M54 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdca3Q99M54 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cdca3Q99M54 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdca3Q99M54 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdca3Q99M54 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.95■□□□□ 0.94
Cdca3Q99M54 Gm12366-201ENSMUST00000121722 873 ntBASIC20.95■□□□□ 0.94
Cdca3Q99M54 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.95■□□□□ 0.94
Cdca3Q99M54 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdca3Q99M54 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.95■□□□□ 0.94
Cdca3Q99M54 Gm5786-201ENSMUST00000085368 882 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms