Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.06■■□□□ 1.12
Pcdhb20Q91XZ9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.06■■□□□ 1.12
Pcdhb20Q91XZ9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb20Q91XZ9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb20Q91XZ9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb20Q91XZ9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb20Q91XZ9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Pcdhb20Q91XZ9 Gm11687-201ENSMUST00000118911 886 ntBASIC22.04■■□□□ 1.12
Pcdhb20Q91XZ9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb20Q91XZ9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.04■■□□□ 1.12
Pcdhb20Q91XZ9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb20Q91XZ9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb20Q91XZ9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Pcdhb20Q91XZ9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb20Q91XZ9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.03■■□□□ 1.12
Pcdhb20Q91XZ9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb20Q91XZ9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Pcdhb20Q91XZ9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.03■■□□□ 1.12
Pcdhb20Q91XZ9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb20Q91XZ9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.02■■□□□ 1.12
Pcdhb20Q91XZ9 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.02■■□□□ 1.12
Pcdhb20Q91XZ9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
Pcdhb20Q91XZ9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb20Q91XZ9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb20Q91XZ9 Gm16437-201ENSMUST00000025669 507 ntBASIC22.01■■□□□ 1.11
Pcdhb20Q91XZ9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb20Q91XZ9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb20Q91XZ9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22■■□□□ 1.11
Pcdhb20Q91XZ9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22■■□□□ 1.11
Pcdhb20Q91XZ9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Pcdhb20Q91XZ9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb20Q91XZ9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Pcdhb20Q91XZ9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb20Q91XZ9 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.99■■□□□ 1.11
Pcdhb20Q91XZ9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb20Q91XZ9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb20Q91XZ9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb20Q91XZ9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhb20Q91XZ9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb20Q91XZ9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.97■■□□□ 1.11
Pcdhb20Q91XZ9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb20Q91XZ9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.96■■□□□ 1.11
Pcdhb20Q91XZ9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb20Q91XZ9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcdhb20Q91XZ9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb20Q91XZ9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Pcdhb20Q91XZ9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb20Q91XZ9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb20Q91XZ9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb20Q91XZ9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb20Q91XZ9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb20Q91XZ9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb20Q91XZ9 Gm37444-201ENSMUST00000193605 439 ntBASIC21.93■■□□□ 1.1
Pcdhb20Q91XZ9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Pcdhb20Q91XZ9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb20Q91XZ9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb20Q91XZ9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb20Q91XZ9 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.92■■□□□ 1.1
Pcdhb20Q91XZ9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Pcdhb20Q91XZ9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb20Q91XZ9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb20Q91XZ9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Pcdhb20Q91XZ9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.92■■□□□ 1.1
Pcdhb20Q91XZ9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb20Q91XZ9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb20Q91XZ9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb20Q91XZ9 Terc-201ENSMUST00000082862 423 ntBASIC21.91■■□□□ 1.1
Pcdhb20Q91XZ9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb20Q91XZ9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.91■■□□□ 1.1
Pcdhb20Q91XZ9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb20Q91XZ9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb20Q91XZ9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb20Q91XZ9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb20Q91XZ9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhb20Q91XZ9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhb20Q91XZ9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhb20Q91XZ9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.89■■□□□ 1.09
Pcdhb20Q91XZ9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb20Q91XZ9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.88■■□□□ 1.09
Pcdhb20Q91XZ9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb20Q91XZ9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb20Q91XZ9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb20Q91XZ9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdhb20Q91XZ9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.87■■□□□ 1.09
Pcdhb20Q91XZ9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb20Q91XZ9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb20Q91XZ9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb20Q91XZ9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb20Q91XZ9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcdhb20Q91XZ9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb20Q91XZ9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb20Q91XZ9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb20Q91XZ9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb20Q91XZ9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb20Q91XZ9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb20Q91XZ9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb20Q91XZ9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb20Q91XZ9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb20Q91XZ9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb20Q91XZ9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms