Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhgb5Q91XX5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.01■■□□□ 1.27
Pcdhgb5Q91XX5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhgb5Q91XX5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb5Q91XX5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb5Q91XX5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhgb5Q91XX5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhgb5Q91XX5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhgb5Q91XX5 Gm14523-201ENSMUST00000117260 558 ntBASIC22.99■■□□□ 1.27
Pcdhgb5Q91XX5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhgb5Q91XX5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Pcdhgb5Q91XX5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb5Q91XX5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhgb5Q91XX5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.97■■□□□ 1.27
Pcdhgb5Q91XX5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhgb5Q91XX5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb5Q91XX5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhgb5Q91XX5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhgb5Q91XX5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Pcdhgb5Q91XX5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhgb5Q91XX5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.93■■□□□ 1.26
Pcdhgb5Q91XX5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.93■■□□□ 1.26
Pcdhgb5Q91XX5 Terc-201ENSMUST00000082862 423 ntBASIC22.93■■□□□ 1.26
Pcdhgb5Q91XX5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhgb5Q91XX5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhgb5Q91XX5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgb5Q91XX5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhgb5Q91XX5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb5Q91XX5 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.91■■□□□ 1.26
Pcdhgb5Q91XX5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.91■■□□□ 1.26
Pcdhgb5Q91XX5 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.91■■□□□ 1.26
Pcdhgb5Q91XX5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.9■■□□□ 1.26
Pcdhgb5Q91XX5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb5Q91XX5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb5Q91XX5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdhgb5Q91XX5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Pcdhgb5Q91XX5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb5Q91XX5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhgb5Q91XX5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgb5Q91XX5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.87■■□□□ 1.25
Pcdhgb5Q91XX5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.87■■□□□ 1.25
Pcdhgb5Q91XX5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgb5Q91XX5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.87■■□□□ 1.25
Pcdhgb5Q91XX5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pcdhgb5Q91XX5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgb5Q91XX5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgb5Q91XX5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Pcdhgb5Q91XX5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgb5Q91XX5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb5Q91XX5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb5Q91XX5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb5Q91XX5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.85■■□□□ 1.25
Pcdhgb5Q91XX5 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.84■■□□□ 1.25
Pcdhgb5Q91XX5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgb5Q91XX5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgb5Q91XX5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Pcdhgb5Q91XX5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.84■■□□□ 1.25
Pcdhgb5Q91XX5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Pcdhgb5Q91XX5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhgb5Q91XX5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.83■■□□□ 1.25
Pcdhgb5Q91XX5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.83■■□□□ 1.25
Pcdhgb5Q91XX5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhgb5Q91XX5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb5Q91XX5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.82■■□□□ 1.24
Pcdhgb5Q91XX5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb5Q91XX5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Pcdhgb5Q91XX5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb5Q91XX5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Pcdhgb5Q91XX5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb5Q91XX5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgb5Q91XX5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.8■■□□□ 1.24
Pcdhgb5Q91XX5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgb5Q91XX5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.8■■□□□ 1.24
Pcdhgb5Q91XX5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.8■■□□□ 1.24
Pcdhgb5Q91XX5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.8■■□□□ 1.24
Pcdhgb5Q91XX5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Pcdhgb5Q91XX5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgb5Q91XX5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
Pcdhgb5Q91XX5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgb5Q91XX5 Gm10420-201ENSMUST00000121713 882 ntBASIC22.78■■□□□ 1.24
Pcdhgb5Q91XX5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgb5Q91XX5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.77■■□□□ 1.24
Pcdhgb5Q91XX5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgb5Q91XX5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb5Q91XX5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb5Q91XX5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb5Q91XX5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgb5Q91XX5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Pcdhgb5Q91XX5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgb5Q91XX5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgb5Q91XX5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgb5Q91XX5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhgb5Q91XX5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
Pcdhgb5Q91XX5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.74■■□□□ 1.23
Pcdhgb5Q91XX5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Pcdhgb5Q91XX5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhgb5Q91XX5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgb5Q91XX5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgb5Q91XX5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Pcdhgb5Q91XX5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms