Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Trex1Q91XB0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trex1Q91XB0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trex1Q91XB0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Trex1Q91XB0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Trex1Q91XB0 Gm14523-201ENSMUST00000117260 558 ntBASIC26.87■■□□□ 1.89
Trex1Q91XB0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trex1Q91XB0 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.87■■□□□ 1.89
Trex1Q91XB0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trex1Q91XB0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Trex1Q91XB0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Trex1Q91XB0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Trex1Q91XB0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Trex1Q91XB0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.85■■□□□ 1.89
Trex1Q91XB0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Trex1Q91XB0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
Trex1Q91XB0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Trex1Q91XB0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trex1Q91XB0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trex1Q91XB0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Trex1Q91XB0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trex1Q91XB0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Trex1Q91XB0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.83■■□□□ 1.89
Trex1Q91XB0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Trex1Q91XB0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Trex1Q91XB0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.81■■□□□ 1.88
Trex1Q91XB0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.81■■□□□ 1.88
Trex1Q91XB0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.81■■□□□ 1.88
Trex1Q91XB0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Trex1Q91XB0 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.8■■□□□ 1.88
Trex1Q91XB0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trex1Q91XB0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Trex1Q91XB0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Trex1Q91XB0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.79■■□□□ 1.88
Trex1Q91XB0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Trex1Q91XB0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
Trex1Q91XB0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.77■■□□□ 1.88
Trex1Q91XB0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Trex1Q91XB0 Terc-201ENSMUST00000082862 423 ntBASIC26.77■■□□□ 1.88
Trex1Q91XB0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.88
Trex1Q91XB0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Trex1Q91XB0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.76■■□□□ 1.87
Trex1Q91XB0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Trex1Q91XB0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Trex1Q91XB0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Trex1Q91XB0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trex1Q91XB0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Trex1Q91XB0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.72■■□□□ 1.87
Trex1Q91XB0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.72■■□□□ 1.87
Trex1Q91XB0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
Trex1Q91XB0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Trex1Q91XB0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Trex1Q91XB0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.71■■□□□ 1.87
Trex1Q91XB0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Trex1Q91XB0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Trex1Q91XB0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Trex1Q91XB0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
Trex1Q91XB0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.69■■□□□ 1.86
Trex1Q91XB0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trex1Q91XB0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.69■■□□□ 1.86
Trex1Q91XB0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Trex1Q91XB0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.68■■□□□ 1.86
Trex1Q91XB0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.68■■□□□ 1.86
Trex1Q91XB0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Trex1Q91XB0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trex1Q91XB0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trex1Q91XB0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Trex1Q91XB0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trex1Q91XB0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trex1Q91XB0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.67■■□□□ 1.86
Trex1Q91XB0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trex1Q91XB0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trex1Q91XB0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trex1Q91XB0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.66■■□□□ 1.86
Trex1Q91XB0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trex1Q91XB0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Trex1Q91XB0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Trex1Q91XB0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Trex1Q91XB0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Trex1Q91XB0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Trex1Q91XB0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Trex1Q91XB0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Trex1Q91XB0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trex1Q91XB0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trex1Q91XB0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.62■■□□□ 1.85
Trex1Q91XB0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trex1Q91XB0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trex1Q91XB0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Trex1Q91XB0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trex1Q91XB0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trex1Q91XB0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trex1Q91XB0 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.6■■□□□ 1.85
Trex1Q91XB0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trex1Q91XB0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Trex1Q91XB0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.59■■□□□ 1.85
Trex1Q91XB0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trex1Q91XB0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.57■■□□□ 1.84
Trex1Q91XB0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.56■■□□□ 1.84
Trex1Q91XB0 Gm10420-201ENSMUST00000121713 882 ntBASIC26.56■■□□□ 1.84
Trex1Q91XB0 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.56■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms