Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
H1fooQ8VIK3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
H1fooQ8VIK3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H1fooQ8VIK3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
H1fooQ8VIK3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H1fooQ8VIK3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
H1fooQ8VIK3 Gm8503-201ENSMUST00000118131 455 ntBASIC19.12■□□□□ 0.65
H1fooQ8VIK3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
H1fooQ8VIK3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H1fooQ8VIK3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.11■□□□□ 0.65
H1fooQ8VIK3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
H1fooQ8VIK3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
H1fooQ8VIK3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
H1fooQ8VIK3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
H1fooQ8VIK3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H1fooQ8VIK3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H1fooQ8VIK3 Gm37136-201ENSMUST00000194368 194 ntBASIC19.1■□□□□ 0.65
H1fooQ8VIK3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
H1fooQ8VIK3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
H1fooQ8VIK3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H1fooQ8VIK3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
H1fooQ8VIK3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
H1fooQ8VIK3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
H1fooQ8VIK3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
H1fooQ8VIK3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
H1fooQ8VIK3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
H1fooQ8VIK3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H1fooQ8VIK3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
H1fooQ8VIK3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
H1fooQ8VIK3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.08■□□□□ 0.64
H1fooQ8VIK3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.08■□□□□ 0.64
H1fooQ8VIK3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
H1fooQ8VIK3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
H1fooQ8VIK3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H1fooQ8VIK3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
H1fooQ8VIK3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
H1fooQ8VIK3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
H1fooQ8VIK3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
H1fooQ8VIK3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
H1fooQ8VIK3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H1fooQ8VIK3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.06■□□□□ 0.64
H1fooQ8VIK3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H1fooQ8VIK3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H1fooQ8VIK3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
H1fooQ8VIK3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H1fooQ8VIK3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
H1fooQ8VIK3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
H1fooQ8VIK3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.05■□□□□ 0.64
H1fooQ8VIK3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
H1fooQ8VIK3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H1fooQ8VIK3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.05■□□□□ 0.64
H1fooQ8VIK3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H1fooQ8VIK3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
H1fooQ8VIK3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H1fooQ8VIK3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H1fooQ8VIK3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H1fooQ8VIK3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H1fooQ8VIK3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.04■□□□□ 0.64
H1fooQ8VIK3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H1fooQ8VIK3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
H1fooQ8VIK3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H1fooQ8VIK3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H1fooQ8VIK3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
H1fooQ8VIK3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
H1fooQ8VIK3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
H1fooQ8VIK3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
H1fooQ8VIK3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
H1fooQ8VIK3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H1fooQ8VIK3 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.01■□□□□ 0.63
H1fooQ8VIK3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H1fooQ8VIK3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H1fooQ8VIK3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
H1fooQ8VIK3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H1fooQ8VIK3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19■□□□□ 0.63
H1fooQ8VIK3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
H1fooQ8VIK3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19■□□□□ 0.63
H1fooQ8VIK3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
H1fooQ8VIK3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
H1fooQ8VIK3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.99■□□□□ 0.63
H1fooQ8VIK3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H1fooQ8VIK3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H1fooQ8VIK3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H1fooQ8VIK3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H1fooQ8VIK3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H1fooQ8VIK3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
H1fooQ8VIK3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.98■□□□□ 0.63
H1fooQ8VIK3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
H1fooQ8VIK3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H1fooQ8VIK3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H1fooQ8VIK3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
H1fooQ8VIK3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H1fooQ8VIK3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
H1fooQ8VIK3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.97■□□□□ 0.63
H1fooQ8VIK3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
H1fooQ8VIK3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
H1fooQ8VIK3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.96■□□□□ 0.63
H1fooQ8VIK3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
H1fooQ8VIK3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H1fooQ8VIK3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H1fooQ8VIK3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms