Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cdhr1Q8VHP6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Cdhr1Q8VHP6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cdhr1Q8VHP6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cdhr1Q8VHP6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cdhr1Q8VHP6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cdhr1Q8VHP6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Cdhr1Q8VHP6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cdhr1Q8VHP6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.51■■□□□ 1.19
Cdhr1Q8VHP6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cdhr1Q8VHP6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cdhr1Q8VHP6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Cdhr1Q8VHP6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cdhr1Q8VHP6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cdhr1Q8VHP6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cdhr1Q8VHP6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cdhr1Q8VHP6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cdhr1Q8VHP6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.49■■□□□ 1.19
Cdhr1Q8VHP6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.49■■□□□ 1.19
Cdhr1Q8VHP6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cdhr1Q8VHP6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cdhr1Q8VHP6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cdhr1Q8VHP6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cdhr1Q8VHP6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cdhr1Q8VHP6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cdhr1Q8VHP6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.46■■□□□ 1.19
Cdhr1Q8VHP6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cdhr1Q8VHP6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cdhr1Q8VHP6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cdhr1Q8VHP6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cdhr1Q8VHP6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cdhr1Q8VHP6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cdhr1Q8VHP6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.44■■□□□ 1.18
Cdhr1Q8VHP6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cdhr1Q8VHP6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cdhr1Q8VHP6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cdhr1Q8VHP6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.43■■□□□ 1.18
Cdhr1Q8VHP6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cdhr1Q8VHP6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cdhr1Q8VHP6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cdhr1Q8VHP6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
Cdhr1Q8VHP6 Gm7332-201ENSMUST00000118351 454 ntBASIC22.42■■□□□ 1.18
Cdhr1Q8VHP6 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.42■■□□□ 1.18
Cdhr1Q8VHP6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cdhr1Q8VHP6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cdhr1Q8VHP6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cdhr1Q8VHP6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.4■■□□□ 1.18
Cdhr1Q8VHP6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cdhr1Q8VHP6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cdhr1Q8VHP6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Cdhr1Q8VHP6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cdhr1Q8VHP6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Cdhr1Q8VHP6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Cdhr1Q8VHP6 Gm14523-201ENSMUST00000117260 558 ntBASIC22.39■■□□□ 1.17
Cdhr1Q8VHP6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cdhr1Q8VHP6 Terc-201ENSMUST00000082862 423 ntBASIC22.39■■□□□ 1.17
Cdhr1Q8VHP6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cdhr1Q8VHP6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cdhr1Q8VHP6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Cdhr1Q8VHP6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.38■■□□□ 1.17
Cdhr1Q8VHP6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cdhr1Q8VHP6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cdhr1Q8VHP6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cdhr1Q8VHP6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cdhr1Q8VHP6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cdhr1Q8VHP6 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.37■■□□□ 1.17
Cdhr1Q8VHP6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
Cdhr1Q8VHP6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.36■■□□□ 1.17
Cdhr1Q8VHP6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.36■■□□□ 1.17
Cdhr1Q8VHP6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cdhr1Q8VHP6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.36■■□□□ 1.17
Cdhr1Q8VHP6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Cdhr1Q8VHP6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Cdhr1Q8VHP6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cdhr1Q8VHP6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cdhr1Q8VHP6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.33■■□□□ 1.17
Cdhr1Q8VHP6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdhr1Q8VHP6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.33■■□□□ 1.17
Cdhr1Q8VHP6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Cdhr1Q8VHP6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Cdhr1Q8VHP6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cdhr1Q8VHP6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.32■■□□□ 1.16
Cdhr1Q8VHP6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cdhr1Q8VHP6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cdhr1Q8VHP6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdhr1Q8VHP6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdhr1Q8VHP6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cdhr1Q8VHP6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdhr1Q8VHP6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdhr1Q8VHP6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cdhr1Q8VHP6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdhr1Q8VHP6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdhr1Q8VHP6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cdhr1Q8VHP6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Cdhr1Q8VHP6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdhr1Q8VHP6 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.29■■□□□ 1.16
Cdhr1Q8VHP6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdhr1Q8VHP6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.29■■□□□ 1.16
Cdhr1Q8VHP6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdhr1Q8VHP6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms