Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
HnrnpuQ8VEK3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
HnrnpuQ8VEK3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
HnrnpuQ8VEK3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
HnrnpuQ8VEK3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
HnrnpuQ8VEK3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HnrnpuQ8VEK3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HnrnpuQ8VEK3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
HnrnpuQ8VEK3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HnrnpuQ8VEK3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
HnrnpuQ8VEK3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
HnrnpuQ8VEK3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.59■■■□□ 2.17
HnrnpuQ8VEK3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
HnrnpuQ8VEK3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
HnrnpuQ8VEK3 Gm7432-201ENSMUST00000210343 879 ntBASIC28.58■■■□□ 2.17
HnrnpuQ8VEK3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
HnrnpuQ8VEK3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
HnrnpuQ8VEK3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
HnrnpuQ8VEK3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
HnrnpuQ8VEK3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
HnrnpuQ8VEK3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
HnrnpuQ8VEK3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HnrnpuQ8VEK3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HnrnpuQ8VEK3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HnrnpuQ8VEK3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
HnrnpuQ8VEK3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.53■■■□□ 2.16
HnrnpuQ8VEK3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
HnrnpuQ8VEK3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC28.53■■■□□ 2.16
HnrnpuQ8VEK3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.52■■■□□ 2.16
HnrnpuQ8VEK3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
HnrnpuQ8VEK3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
HnrnpuQ8VEK3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
HnrnpuQ8VEK3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.51■■■□□ 2.15
HnrnpuQ8VEK3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
HnrnpuQ8VEK3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
HnrnpuQ8VEK3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
HnrnpuQ8VEK3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
HnrnpuQ8VEK3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
HnrnpuQ8VEK3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
HnrnpuQ8VEK3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
HnrnpuQ8VEK3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
HnrnpuQ8VEK3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
HnrnpuQ8VEK3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
HnrnpuQ8VEK3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
HnrnpuQ8VEK3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
HnrnpuQ8VEK3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
HnrnpuQ8VEK3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
HnrnpuQ8VEK3 Gm11599-201ENSMUST00000118720 878 ntBASIC28.45■■■□□ 2.14
HnrnpuQ8VEK3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
HnrnpuQ8VEK3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.45■■■□□ 2.14
HnrnpuQ8VEK3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
HnrnpuQ8VEK3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
HnrnpuQ8VEK3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
HnrnpuQ8VEK3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
HnrnpuQ8VEK3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
HnrnpuQ8VEK3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
HnrnpuQ8VEK3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
HnrnpuQ8VEK3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
HnrnpuQ8VEK3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
HnrnpuQ8VEK3 Gm4799-201ENSMUST00000095396 657 ntBASIC28.42■■■□□ 2.14
HnrnpuQ8VEK3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
HnrnpuQ8VEK3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
HnrnpuQ8VEK3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.41■■■□□ 2.14
HnrnpuQ8VEK3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.41■■■□□ 2.14
HnrnpuQ8VEK3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
HnrnpuQ8VEK3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
HnrnpuQ8VEK3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
HnrnpuQ8VEK3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.39■■■□□ 2.14
HnrnpuQ8VEK3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
HnrnpuQ8VEK3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
HnrnpuQ8VEK3 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.38■■■□□ 2.13
HnrnpuQ8VEK3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
HnrnpuQ8VEK3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.38■■■□□ 2.13
HnrnpuQ8VEK3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
HnrnpuQ8VEK3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
HnrnpuQ8VEK3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HnrnpuQ8VEK3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.37■■■□□ 2.13
HnrnpuQ8VEK3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HnrnpuQ8VEK3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
HnrnpuQ8VEK3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
HnrnpuQ8VEK3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
HnrnpuQ8VEK3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
HnrnpuQ8VEK3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
HnrnpuQ8VEK3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
HnrnpuQ8VEK3 Gm42699-201ENSMUST00000198104 1657 ntBASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HnrnpuQ8VEK3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HnrnpuQ8VEK3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms