Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.15■■□□□ 1.62
Upb1Q8VC97 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Upb1Q8VC97 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Upb1Q8VC97 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.15■■□□□ 1.62
Upb1Q8VC97 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Upb1Q8VC97 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Upb1Q8VC97 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
Upb1Q8VC97 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Upb1Q8VC97 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Upb1Q8VC97 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Upb1Q8VC97 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.1■■□□□ 1.61
Upb1Q8VC97 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Upb1Q8VC97 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Upb1Q8VC97 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Upb1Q8VC97 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Upb1Q8VC97 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Upb1Q8VC97 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Upb1Q8VC97 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.09■■□□□ 1.61
Upb1Q8VC97 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Upb1Q8VC97 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Upb1Q8VC97 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.08■■□□□ 1.61
Upb1Q8VC97 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.08■■□□□ 1.61
Upb1Q8VC97 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
Upb1Q8VC97 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Upb1Q8VC97 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
Upb1Q8VC97 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Upb1Q8VC97 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Upb1Q8VC97 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Upb1Q8VC97 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Upb1Q8VC97 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Upb1Q8VC97 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Upb1Q8VC97 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Upb1Q8VC97 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Upb1Q8VC97 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Upb1Q8VC97 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Upb1Q8VC97 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Upb1Q8VC97 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Upb1Q8VC97 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Upb1Q8VC97 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Upb1Q8VC97 Terc-201ENSMUST00000082862 423 ntBASIC25.05■■□□□ 1.6
Upb1Q8VC97 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Upb1Q8VC97 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Upb1Q8VC97 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Upb1Q8VC97 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Upb1Q8VC97 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Upb1Q8VC97 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.03■■□□□ 1.6
Upb1Q8VC97 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Upb1Q8VC97 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.03■■□□□ 1.6
Upb1Q8VC97 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Upb1Q8VC97 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Upb1Q8VC97 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.03■■□□□ 1.6
Upb1Q8VC97 Cap2-205ENSMUST00000225824 1634 ntBASIC25.02■■□□□ 1.6
Upb1Q8VC97 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Upb1Q8VC97 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.02■■□□□ 1.6
Upb1Q8VC97 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Upb1Q8VC97 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25■■□□□ 1.59
Upb1Q8VC97 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25■■□□□ 1.59
Upb1Q8VC97 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25■■□□□ 1.59
Upb1Q8VC97 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Upb1Q8VC97 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Upb1Q8VC97 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.98■■□□□ 1.59
Upb1Q8VC97 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Upb1Q8VC97 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Upb1Q8VC97 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Upb1Q8VC97 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Upb1Q8VC97 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Upb1Q8VC97 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Upb1Q8VC97 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
Upb1Q8VC97 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Upb1Q8VC97 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.59
Upb1Q8VC97 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Upb1Q8VC97 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Upb1Q8VC97 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Upb1Q8VC97 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.95■■□□□ 1.58
Upb1Q8VC97 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.95■■□□□ 1.58
Upb1Q8VC97 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Upb1Q8VC97 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Upb1Q8VC97 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.94■■□□□ 1.58
Upb1Q8VC97 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Upb1Q8VC97 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Upb1Q8VC97 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Upb1Q8VC97 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Upb1Q8VC97 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Upb1Q8VC97 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.92■■□□□ 1.58
Upb1Q8VC97 Gm12366-201ENSMUST00000121722 873 ntBASIC24.92■■□□□ 1.58
Upb1Q8VC97 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.92■■□□□ 1.58
Upb1Q8VC97 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.92■■□□□ 1.58
Upb1Q8VC97 Gm5786-201ENSMUST00000085368 882 ntBASIC24.92■■□□□ 1.58
Upb1Q8VC97 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Upb1Q8VC97 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Upb1Q8VC97 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Upb1Q8VC97 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Upb1Q8VC97 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Upb1Q8VC97 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Upb1Q8VC97 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Upb1Q8VC97 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Upb1Q8VC97 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Upb1Q8VC97 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Upb1Q8VC97 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.89■■□□□ 1.58
Upb1Q8VC97 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms