Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC29.95■■■□□ 2.39
Chmp7Q8R1T1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Chmp7Q8R1T1 AC153911.1-201ENSMUST00000220378 758 ntBASIC29.95■■■□□ 2.39
Chmp7Q8R1T1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Chmp7Q8R1T1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Chmp7Q8R1T1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC29.94■■■□□ 2.38
Chmp7Q8R1T1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC29.94■■■□□ 2.38
Chmp7Q8R1T1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Chmp7Q8R1T1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Chmp7Q8R1T1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC29.92■■■□□ 2.38
Chmp7Q8R1T1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Chmp7Q8R1T1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Chmp7Q8R1T1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Chmp7Q8R1T1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC29.91■■■□□ 2.38
Chmp7Q8R1T1 AC151971.4-201ENSMUST00000214717 704 ntBASIC29.91■■■□□ 2.38
Chmp7Q8R1T1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC29.91■■■□□ 2.38
Chmp7Q8R1T1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Chmp7Q8R1T1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
Chmp7Q8R1T1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Chmp7Q8R1T1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC29.89■■■□□ 2.38
Chmp7Q8R1T1 Terc-201ENSMUST00000082862 423 ntBASIC29.89■■■□□ 2.38
Chmp7Q8R1T1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Chmp7Q8R1T1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Chmp7Q8R1T1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Chmp7Q8R1T1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Chmp7Q8R1T1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Chmp7Q8R1T1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Chmp7Q8R1T1 Amer2-203ENSMUST00000225247 2662 ntBASIC29.86■■■□□ 2.37
Chmp7Q8R1T1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Chmp7Q8R1T1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Chmp7Q8R1T1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Chmp7Q8R1T1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Chmp7Q8R1T1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
Chmp7Q8R1T1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC29.83■■■□□ 2.37
Chmp7Q8R1T1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Chmp7Q8R1T1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC29.83■■■□□ 2.37
Chmp7Q8R1T1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC29.83■■■□□ 2.37
Chmp7Q8R1T1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC29.82■■■□□ 2.36
Chmp7Q8R1T1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC29.82■■■□□ 2.36
Chmp7Q8R1T1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
Chmp7Q8R1T1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
Chmp7Q8R1T1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
Chmp7Q8R1T1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Chmp7Q8R1T1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Chmp7Q8R1T1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
Chmp7Q8R1T1 Gm5067-201ENSMUST00000170449 1009 ntBASIC29.8■■■□□ 2.36
Chmp7Q8R1T1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Chmp7Q8R1T1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Chmp7Q8R1T1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC29.79■■■□□ 2.36
Chmp7Q8R1T1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Chmp7Q8R1T1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.79■■■□□ 2.36
Chmp7Q8R1T1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Chmp7Q8R1T1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Chmp7Q8R1T1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Chmp7Q8R1T1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Chmp7Q8R1T1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC29.78■■■□□ 2.36
Chmp7Q8R1T1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Chmp7Q8R1T1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Chmp7Q8R1T1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Chmp7Q8R1T1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC29.77■■■□□ 2.36
Chmp7Q8R1T1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.36
Chmp7Q8R1T1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
Chmp7Q8R1T1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Chmp7Q8R1T1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Chmp7Q8R1T1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Chmp7Q8R1T1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC29.75■■■□□ 2.35
Chmp7Q8R1T1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Chmp7Q8R1T1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Chmp7Q8R1T1 Gm10420-201ENSMUST00000121713 882 ntBASIC29.73■■■□□ 2.35
Chmp7Q8R1T1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Chmp7Q8R1T1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Chmp7Q8R1T1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Chmp7Q8R1T1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Chmp7Q8R1T1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Chmp7Q8R1T1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC29.71■■■□□ 2.35
Chmp7Q8R1T1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC29.7■■■□□ 2.35
Chmp7Q8R1T1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Chmp7Q8R1T1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.35
Chmp7Q8R1T1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Chmp7Q8R1T1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Chmp7Q8R1T1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Chmp7Q8R1T1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Chmp7Q8R1T1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Chmp7Q8R1T1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
Chmp7Q8R1T1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Chmp7Q8R1T1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC29.67■■■□□ 2.34
Chmp7Q8R1T1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC29.65■■■□□ 2.34
Chmp7Q8R1T1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
Chmp7Q8R1T1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Chmp7Q8R1T1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Chmp7Q8R1T1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Chmp7Q8R1T1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Chmp7Q8R1T1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
Chmp7Q8R1T1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Chmp7Q8R1T1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC29.61■■■□□ 2.33
Chmp7Q8R1T1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Chmp7Q8R1T1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
Chmp7Q8R1T1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Chmp7Q8R1T1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Chmp7Q8R1T1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC29.6■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 162.7 ms