Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Rpp40Q8R1F9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rpp40Q8R1F9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rpp40Q8R1F9 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.8■■□□□ 1.56
Rpp40Q8R1F9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rpp40Q8R1F9 Gm9812-201ENSMUST00000061934 968 ntBASIC24.8■■□□□ 1.56
Rpp40Q8R1F9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Rpp40Q8R1F9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Rpp40Q8R1F9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Rpp40Q8R1F9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.78■■□□□ 1.56
Rpp40Q8R1F9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Rpp40Q8R1F9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rpp40Q8R1F9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Rpp40Q8R1F9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.77■■□□□ 1.56
Rpp40Q8R1F9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.77■■□□□ 1.56
Rpp40Q8R1F9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Rpp40Q8R1F9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.76■■□□□ 1.55
Rpp40Q8R1F9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.76■■□□□ 1.55
Rpp40Q8R1F9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rpp40Q8R1F9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.75■■□□□ 1.55
Rpp40Q8R1F9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpp40Q8R1F9 Scarna2-201ENSMUST00000157560 414 ntBASIC24.75■■□□□ 1.55
Rpp40Q8R1F9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpp40Q8R1F9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpp40Q8R1F9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Rpp40Q8R1F9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpp40Q8R1F9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpp40Q8R1F9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpp40Q8R1F9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.74■■□□□ 1.55
Rpp40Q8R1F9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpp40Q8R1F9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Rpp40Q8R1F9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rpp40Q8R1F9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Rpp40Q8R1F9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rpp40Q8R1F9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Rpp40Q8R1F9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.73■■□□□ 1.55
Rpp40Q8R1F9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rpp40Q8R1F9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Rpp40Q8R1F9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rpp40Q8R1F9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rpp40Q8R1F9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Rpp40Q8R1F9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rpp40Q8R1F9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Rpp40Q8R1F9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Rpp40Q8R1F9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rpp40Q8R1F9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Rpp40Q8R1F9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.69■■□□□ 1.54
Rpp40Q8R1F9 Gm9806-201ENSMUST00000051080 552 ntBASIC24.69■■□□□ 1.54
Rpp40Q8R1F9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Rpp40Q8R1F9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Rpp40Q8R1F9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Rpp40Q8R1F9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rpp40Q8R1F9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rpp40Q8R1F9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rpp40Q8R1F9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rpp40Q8R1F9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Rpp40Q8R1F9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rpp40Q8R1F9 Gm16437-201ENSMUST00000025669 507 ntBASIC24.67■■□□□ 1.54
Rpp40Q8R1F9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
Rpp40Q8R1F9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rpp40Q8R1F9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rpp40Q8R1F9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Rpp40Q8R1F9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rpp40Q8R1F9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
Rpp40Q8R1F9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Rpp40Q8R1F9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Rpp40Q8R1F9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpp40Q8R1F9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Rpp40Q8R1F9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rpp40Q8R1F9 Mir6538-201ENSMUST00000183713 110 ntBASIC24.64■■□□□ 1.54
Rpp40Q8R1F9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
Rpp40Q8R1F9 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.63■■□□□ 1.53
Rpp40Q8R1F9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Rpp40Q8R1F9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rpp40Q8R1F9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.63■■□□□ 1.53
Rpp40Q8R1F9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Rpp40Q8R1F9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rpp40Q8R1F9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.62■■□□□ 1.53
Rpp40Q8R1F9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rpp40Q8R1F9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rpp40Q8R1F9 Gm11687-201ENSMUST00000118911 886 ntBASIC24.62■■□□□ 1.53
Rpp40Q8R1F9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Rpp40Q8R1F9 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.62■■□□□ 1.53
Rpp40Q8R1F9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rpp40Q8R1F9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rpp40Q8R1F9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Rpp40Q8R1F9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rpp40Q8R1F9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.61■■□□□ 1.53
Rpp40Q8R1F9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Rpp40Q8R1F9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.6■■□□□ 1.53
Rpp40Q8R1F9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpp40Q8R1F9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpp40Q8R1F9 Terc-201ENSMUST00000082862 423 ntBASIC24.59■■□□□ 1.53
Rpp40Q8R1F9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rpp40Q8R1F9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rpp40Q8R1F9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rpp40Q8R1F9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rpp40Q8R1F9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rpp40Q8R1F9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rpp40Q8R1F9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms