Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Sf3a1Q8K4Z5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Sf3a1Q8K4Z5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Sf3a1Q8K4Z5 Mir3960-201ENSMUST00000198213 73 ntBASIC28.09■■■□□ 2.09
Sf3a1Q8K4Z5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Sf3a1Q8K4Z5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Sf3a1Q8K4Z5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.08■■■□□ 2.09
Sf3a1Q8K4Z5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Sf3a1Q8K4Z5 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.08■■■□□ 2.09
Sf3a1Q8K4Z5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
Sf3a1Q8K4Z5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Sf3a1Q8K4Z5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Sf3a1Q8K4Z5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.07■■■□□ 2.08
Sf3a1Q8K4Z5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Sf3a1Q8K4Z5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC28.07■■■□□ 2.08
Sf3a1Q8K4Z5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Sf3a1Q8K4Z5 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.06■■■□□ 2.08
Sf3a1Q8K4Z5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Sf3a1Q8K4Z5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.06■■■□□ 2.08
Sf3a1Q8K4Z5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC28.06■■■□□ 2.08
Sf3a1Q8K4Z5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Sf3a1Q8K4Z5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sf3a1Q8K4Z5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sf3a1Q8K4Z5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sf3a1Q8K4Z5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.04■■■□□ 2.08
Sf3a1Q8K4Z5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.03■■■□□ 2.08
Sf3a1Q8K4Z5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Sf3a1Q8K4Z5 Gm45364-201ENSMUST00000210883 159 ntBASIC28.03■■■□□ 2.08
Sf3a1Q8K4Z5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.03■■■□□ 2.08
Sf3a1Q8K4Z5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Sf3a1Q8K4Z5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Sf3a1Q8K4Z5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Sf3a1Q8K4Z5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
Sf3a1Q8K4Z5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Sf3a1Q8K4Z5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
Sf3a1Q8K4Z5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28■■■□□ 2.07
Sf3a1Q8K4Z5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28■■■□□ 2.07
Sf3a1Q8K4Z5 Gm6311-201ENSMUST00000073790 878 ntBASIC28■■■□□ 2.07
Sf3a1Q8K4Z5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28■■■□□ 2.07
Sf3a1Q8K4Z5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC28■■■□□ 2.07
Sf3a1Q8K4Z5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC28■■■□□ 2.07
Sf3a1Q8K4Z5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
Sf3a1Q8K4Z5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Sf3a1Q8K4Z5 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.98■■■□□ 2.07
Sf3a1Q8K4Z5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.98■■■□□ 2.07
Sf3a1Q8K4Z5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sf3a1Q8K4Z5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sf3a1Q8K4Z5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
Sf3a1Q8K4Z5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sf3a1Q8K4Z5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.97■■■□□ 2.07
Sf3a1Q8K4Z5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sf3a1Q8K4Z5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.96■■■□□ 2.07
Sf3a1Q8K4Z5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Sf3a1Q8K4Z5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Sf3a1Q8K4Z5 Gm9812-201ENSMUST00000061934 968 ntBASIC27.95■■■□□ 2.06
Sf3a1Q8K4Z5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sf3a1Q8K4Z5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.93■■■□□ 2.06
Sf3a1Q8K4Z5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sf3a1Q8K4Z5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sf3a1Q8K4Z5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sf3a1Q8K4Z5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sf3a1Q8K4Z5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Sf3a1Q8K4Z5 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.92■■■□□ 2.06
Sf3a1Q8K4Z5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Sf3a1Q8K4Z5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Sf3a1Q8K4Z5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Sf3a1Q8K4Z5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
Sf3a1Q8K4Z5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.9■■■□□ 2.06
Sf3a1Q8K4Z5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
Sf3a1Q8K4Z5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Sf3a1Q8K4Z5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Sf3a1Q8K4Z5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Sf3a1Q8K4Z5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27.89■■■□□ 2.06
Sf3a1Q8K4Z5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.05
Sf3a1Q8K4Z5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Sf3a1Q8K4Z5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Sf3a1Q8K4Z5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sf3a1Q8K4Z5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Sf3a1Q8K4Z5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Sf3a1Q8K4Z5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sf3a1Q8K4Z5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Sf3a1Q8K4Z5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Sf3a1Q8K4Z5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Sf3a1Q8K4Z5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Sf3a1Q8K4Z5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Sf3a1Q8K4Z5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Sf3a1Q8K4Z5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Sf3a1Q8K4Z5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
Sf3a1Q8K4Z5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Sf3a1Q8K4Z5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Sf3a1Q8K4Z5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
Sf3a1Q8K4Z5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Sf3a1Q8K4Z5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Sf3a1Q8K4Z5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Sf3a1Q8K4Z5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
Sf3a1Q8K4Z5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
Sf3a1Q8K4Z5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Sf3a1Q8K4Z5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Sf3a1Q8K4Z5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
Sf3a1Q8K4Z5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.81■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms