Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clrn1Q8K445 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clrn1Q8K445 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clrn1Q8K445 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clrn1Q8K445 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clrn1Q8K445 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clrn1Q8K445 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Clrn1Q8K445 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clrn1Q8K445 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clrn1Q8K445 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clrn1Q8K445 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clrn1Q8K445 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clrn1Q8K445 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Clrn1Q8K445 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clrn1Q8K445 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clrn1Q8K445 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clrn1Q8K445 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clrn1Q8K445 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Clrn1Q8K445 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Clrn1Q8K445 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Clrn1Q8K445 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clrn1Q8K445 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clrn1Q8K445 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clrn1Q8K445 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clrn1Q8K445 Gm4799-201ENSMUST00000095396 657 ntBASIC21.54■■□□□ 1.04
Clrn1Q8K445 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clrn1Q8K445 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clrn1Q8K445 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clrn1Q8K445 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clrn1Q8K445 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.53■■□□□ 1.04
Clrn1Q8K445 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clrn1Q8K445 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.52■■□□□ 1.04
Clrn1Q8K445 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clrn1Q8K445 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clrn1Q8K445 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Clrn1Q8K445 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Clrn1Q8K445 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Clrn1Q8K445 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Clrn1Q8K445 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.5■■□□□ 1.03
Clrn1Q8K445 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Clrn1Q8K445 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.5■■□□□ 1.03
Clrn1Q8K445 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.5■■□□□ 1.03
Clrn1Q8K445 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Clrn1Q8K445 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Clrn1Q8K445 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Clrn1Q8K445 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Clrn1Q8K445 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Clrn1Q8K445 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Clrn1Q8K445 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Clrn1Q8K445 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Clrn1Q8K445 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Clrn1Q8K445 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.48■■□□□ 1.03
Clrn1Q8K445 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Clrn1Q8K445 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Clrn1Q8K445 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Clrn1Q8K445 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Clrn1Q8K445 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.47■■□□□ 1.03
Clrn1Q8K445 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Clrn1Q8K445 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Clrn1Q8K445 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Clrn1Q8K445 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn1Q8K445 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn1Q8K445 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn1Q8K445 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn1Q8K445 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.46■■□□□ 1.03
Clrn1Q8K445 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn1Q8K445 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Clrn1Q8K445 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Clrn1Q8K445 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clrn1Q8K445 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Clrn1Q8K445 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Clrn1Q8K445 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clrn1Q8K445 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clrn1Q8K445 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clrn1Q8K445 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clrn1Q8K445 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Clrn1Q8K445 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clrn1Q8K445 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Clrn1Q8K445 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clrn1Q8K445 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clrn1Q8K445 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clrn1Q8K445 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Clrn1Q8K445 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Clrn1Q8K445 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.43■■□□□ 1.02
Clrn1Q8K445 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clrn1Q8K445 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Clrn1Q8K445 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Clrn1Q8K445 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.41■■□□□ 1.02
Clrn1Q8K445 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Clrn1Q8K445 Mir3960-201ENSMUST00000198213 73 ntBASIC21.41■■□□□ 1.02
Clrn1Q8K445 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.41■■□□□ 1.02
Clrn1Q8K445 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clrn1Q8K445 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Clrn1Q8K445 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Clrn1Q8K445 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.4■■□□□ 1.02
Clrn1Q8K445 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.4■■□□□ 1.02
Clrn1Q8K445 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.4■■□□□ 1.02
Clrn1Q8K445 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Clrn1Q8K445 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clrn1Q8K445 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms