Protein–RNA interactions for Protein: Q8K2V1

Ppp4r1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r1Q8K2V1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ppp4r1Q8K2V1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ppp4r1Q8K2V1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Ppp4r1Q8K2V1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ppp4r1Q8K2V1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ppp4r1Q8K2V1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ppp4r1Q8K2V1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ppp4r1Q8K2V1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ppp4r1Q8K2V1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ppp4r1Q8K2V1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ppp4r1Q8K2V1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ppp4r1Q8K2V1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Ppp4r1Q8K2V1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ppp4r1Q8K2V1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ppp4r1Q8K2V1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ppp4r1Q8K2V1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ppp4r1Q8K2V1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ppp4r1Q8K2V1 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.33■■□□□ 1.33
Ppp4r1Q8K2V1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ppp4r1Q8K2V1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ppp4r1Q8K2V1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ppp4r1Q8K2V1 Gm37136-201ENSMUST00000194368 194 ntBASIC23.32■■□□□ 1.32
Ppp4r1Q8K2V1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ppp4r1Q8K2V1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ppp4r1Q8K2V1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ppp4r1Q8K2V1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ppp4r1Q8K2V1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ppp4r1Q8K2V1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppp4r1Q8K2V1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppp4r1Q8K2V1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppp4r1Q8K2V1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppp4r1Q8K2V1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppp4r1Q8K2V1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ppp4r1Q8K2V1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.29■■□□□ 1.32
Ppp4r1Q8K2V1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ppp4r1Q8K2V1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ppp4r1Q8K2V1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ppp4r1Q8K2V1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ppp4r1Q8K2V1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Ppp4r1Q8K2V1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Ppp4r1Q8K2V1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ppp4r1Q8K2V1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ppp4r1Q8K2V1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ppp4r1Q8K2V1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.24■■□□□ 1.31
Ppp4r1Q8K2V1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.24■■□□□ 1.31
Ppp4r1Q8K2V1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ppp4r1Q8K2V1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Ppp4r1Q8K2V1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ppp4r1Q8K2V1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ppp4r1Q8K2V1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.23■■□□□ 1.31
Ppp4r1Q8K2V1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ppp4r1Q8K2V1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.23■■□□□ 1.31
Ppp4r1Q8K2V1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.22■■□□□ 1.31
Ppp4r1Q8K2V1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ppp4r1Q8K2V1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ppp4r1Q8K2V1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ppp4r1Q8K2V1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ppp4r1Q8K2V1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ppp4r1Q8K2V1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ppp4r1Q8K2V1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ppp4r1Q8K2V1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.21■■□□□ 1.31
Ppp4r1Q8K2V1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ppp4r1Q8K2V1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ppp4r1Q8K2V1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ppp4r1Q8K2V1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ppp4r1Q8K2V1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ppp4r1Q8K2V1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ppp4r1Q8K2V1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ppp4r1Q8K2V1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Ppp4r1Q8K2V1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ppp4r1Q8K2V1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ppp4r1Q8K2V1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ppp4r1Q8K2V1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.17■■□□□ 1.3
Ppp4r1Q8K2V1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ppp4r1Q8K2V1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ppp4r1Q8K2V1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ppp4r1Q8K2V1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ppp4r1Q8K2V1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ppp4r1Q8K2V1 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.16■■□□□ 1.3
Ppp4r1Q8K2V1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.15■■□□□ 1.3
Ppp4r1Q8K2V1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ppp4r1Q8K2V1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ppp4r1Q8K2V1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Ppp4r1Q8K2V1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ppp4r1Q8K2V1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ppp4r1Q8K2V1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ppp4r1Q8K2V1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ppp4r1Q8K2V1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Ppp4r1Q8K2V1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ppp4r1Q8K2V1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.13■■□□□ 1.29
Ppp4r1Q8K2V1 Gm7432-201ENSMUST00000210343 879 ntBASIC23.13■■□□□ 1.29
Ppp4r1Q8K2V1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ppp4r1Q8K2V1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ppp4r1Q8K2V1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.12■■□□□ 1.29
Ppp4r1Q8K2V1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ppp4r1Q8K2V1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ppp4r1Q8K2V1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ppp4r1Q8K2V1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ppp4r1Q8K2V1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.11■■□□□ 1.29
Ppp4r1Q8K2V1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms