Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Kdm1bQ8CIG3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Kdm1bQ8CIG3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
Kdm1bQ8CIG3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Kdm1bQ8CIG3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Kdm1bQ8CIG3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
Kdm1bQ8CIG3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Kdm1bQ8CIG3 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.94■■□□□ 1.42
Kdm1bQ8CIG3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Kdm1bQ8CIG3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Kdm1bQ8CIG3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Kdm1bQ8CIG3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Kdm1bQ8CIG3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Kdm1bQ8CIG3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Kdm1bQ8CIG3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Kdm1bQ8CIG3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Kdm1bQ8CIG3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Kdm1bQ8CIG3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Kdm1bQ8CIG3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Kdm1bQ8CIG3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Kdm1bQ8CIG3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm1bQ8CIG3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm1bQ8CIG3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.9■■□□□ 1.42
Kdm1bQ8CIG3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm1bQ8CIG3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Kdm1bQ8CIG3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Kdm1bQ8CIG3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm1bQ8CIG3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm1bQ8CIG3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm1bQ8CIG3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm1bQ8CIG3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Kdm1bQ8CIG3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Kdm1bQ8CIG3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Kdm1bQ8CIG3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.88■■□□□ 1.41
Kdm1bQ8CIG3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Kdm1bQ8CIG3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Kdm1bQ8CIG3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Kdm1bQ8CIG3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm1bQ8CIG3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm1bQ8CIG3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.86■■□□□ 1.41
Kdm1bQ8CIG3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.86■■□□□ 1.41
Kdm1bQ8CIG3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm1bQ8CIG3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm1bQ8CIG3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Kdm1bQ8CIG3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm1bQ8CIG3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm1bQ8CIG3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm1bQ8CIG3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm1bQ8CIG3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Kdm1bQ8CIG3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.84■■□□□ 1.41
Kdm1bQ8CIG3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Kdm1bQ8CIG3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Kdm1bQ8CIG3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Kdm1bQ8CIG3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Kdm1bQ8CIG3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Kdm1bQ8CIG3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Kdm1bQ8CIG3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.83■■□□□ 1.41
Kdm1bQ8CIG3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Kdm1bQ8CIG3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.82■■□□□ 1.4
Kdm1bQ8CIG3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.82■■□□□ 1.4
Kdm1bQ8CIG3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Kdm1bQ8CIG3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Kdm1bQ8CIG3 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.81■■□□□ 1.4
Kdm1bQ8CIG3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm1bQ8CIG3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm1bQ8CIG3 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.79■■□□□ 1.4
Kdm1bQ8CIG3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Kdm1bQ8CIG3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Kdm1bQ8CIG3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Kdm1bQ8CIG3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm1bQ8CIG3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm1bQ8CIG3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm1bQ8CIG3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.77■■□□□ 1.4
Kdm1bQ8CIG3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm1bQ8CIG3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm1bQ8CIG3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm1bQ8CIG3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
Kdm1bQ8CIG3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm1bQ8CIG3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Kdm1bQ8CIG3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Kdm1bQ8CIG3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Kdm1bQ8CIG3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Kdm1bQ8CIG3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Kdm1bQ8CIG3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Kdm1bQ8CIG3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Kdm1bQ8CIG3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Kdm1bQ8CIG3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Kdm1bQ8CIG3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Kdm1bQ8CIG3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Kdm1bQ8CIG3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm1bQ8CIG3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm1bQ8CIG3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm1bQ8CIG3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Kdm1bQ8CIG3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Kdm1bQ8CIG3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Kdm1bQ8CIG3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.71■■□□□ 1.39
Kdm1bQ8CIG3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.7■■□□□ 1.38
Kdm1bQ8CIG3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Kdm1bQ8CIG3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Kdm1bQ8CIG3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms