Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd4Q8CC84 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd4Q8CC84 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd4Q8CC84 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lysmd4Q8CC84 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Lysmd4Q8CC84 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lysmd4Q8CC84 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.64■□□□□ 0.89
Lysmd4Q8CC84 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd4Q8CC84 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lysmd4Q8CC84 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd4Q8CC84 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.63■□□□□ 0.89
Lysmd4Q8CC84 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.63■□□□□ 0.89
Lysmd4Q8CC84 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd4Q8CC84 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lysmd4Q8CC84 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd4Q8CC84 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.62■□□□□ 0.89
Lysmd4Q8CC84 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd4Q8CC84 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lysmd4Q8CC84 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Lysmd4Q8CC84 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Lysmd4Q8CC84 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd4Q8CC84 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd4Q8CC84 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd4Q8CC84 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lysmd4Q8CC84 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd4Q8CC84 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd4Q8CC84 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lysmd4Q8CC84 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lysmd4Q8CC84 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lysmd4Q8CC84 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lysmd4Q8CC84 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lysmd4Q8CC84 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Gm24970-201ENSMUST00000175582 82 ntBASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lysmd4Q8CC84 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Lysmd4Q8CC84 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd4Q8CC84 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.56■□□□□ 0.88
Lysmd4Q8CC84 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd4Q8CC84 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lysmd4Q8CC84 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.55■□□□□ 0.88
Lysmd4Q8CC84 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd4Q8CC84 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.55■□□□□ 0.88
Lysmd4Q8CC84 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lysmd4Q8CC84 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd4Q8CC84 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd4Q8CC84 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Lysmd4Q8CC84 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd4Q8CC84 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lysmd4Q8CC84 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 Gm9397-201ENSMUST00000200125 605 ntBASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lysmd4Q8CC84 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd4Q8CC84 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd4Q8CC84 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd4Q8CC84 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Lysmd4Q8CC84 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lysmd4Q8CC84 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lysmd4Q8CC84 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
Lysmd4Q8CC84 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Lysmd4Q8CC84 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd4Q8CC84 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Lysmd4Q8CC84 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.5■□□□□ 0.87
Lysmd4Q8CC84 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd4Q8CC84 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd4Q8CC84 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd4Q8CC84 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.49■□□□□ 0.87
Lysmd4Q8CC84 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd4Q8CC84 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd4Q8CC84 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.48■□□□□ 0.87
Lysmd4Q8CC84 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms