Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm9949Q8C9F4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm9949Q8C9F4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm9949Q8C9F4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm9949Q8C9F4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
Gm9949Q8C9F4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm9949Q8C9F4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm9949Q8C9F4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm9949Q8C9F4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm9949Q8C9F4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gm9949Q8C9F4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm9949Q8C9F4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm9949Q8C9F4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm9949Q8C9F4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Gm9949Q8C9F4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm9949Q8C9F4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm9949Q8C9F4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm9949Q8C9F4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm9949Q8C9F4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm9949Q8C9F4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm9949Q8C9F4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm9949Q8C9F4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm9949Q8C9F4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm9949Q8C9F4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Gm9949Q8C9F4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm9949Q8C9F4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm9949Q8C9F4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.11■□□□□ 0.49
Gm9949Q8C9F4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.11■□□□□ 0.49
Gm9949Q8C9F4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm9949Q8C9F4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Gm9949Q8C9F4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm9949Q8C9F4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm9949Q8C9F4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Gm9949Q8C9F4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm9949Q8C9F4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm9949Q8C9F4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Gm9949Q8C9F4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm9949Q8C9F4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm9949Q8C9F4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm9949Q8C9F4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm9949Q8C9F4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Gm9949Q8C9F4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm9949Q8C9F4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm9949Q8C9F4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gm9949Q8C9F4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm9949Q8C9F4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm9949Q8C9F4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Gm9949Q8C9F4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm9949Q8C9F4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm9949Q8C9F4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm9949Q8C9F4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.05■□□□□ 0.48
Gm9949Q8C9F4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm9949Q8C9F4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm9949Q8C9F4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm9949Q8C9F4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm9949Q8C9F4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm9949Q8C9F4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.04■□□□□ 0.48
Gm9949Q8C9F4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gm9949Q8C9F4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm9949Q8C9F4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
Gm9949Q8C9F4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm9949Q8C9F4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.04■□□□□ 0.48
Gm9949Q8C9F4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm9949Q8C9F4 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.04■□□□□ 0.48
Gm9949Q8C9F4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm9949Q8C9F4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm9949Q8C9F4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm9949Q8C9F4 Gm7432-201ENSMUST00000210343 879 ntBASIC18.03■□□□□ 0.48
Gm9949Q8C9F4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm9949Q8C9F4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm9949Q8C9F4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm9949Q8C9F4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gm9949Q8C9F4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.01■□□□□ 0.47
Gm9949Q8C9F4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm9949Q8C9F4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.01■□□□□ 0.47
Gm9949Q8C9F4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Gm9949Q8C9F4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm9949Q8C9F4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm9949Q8C9F4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18■□□□□ 0.47
Gm9949Q8C9F4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm9949Q8C9F4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm9949Q8C9F4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm9949Q8C9F4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm9949Q8C9F4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm9949Q8C9F4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm9949Q8C9F4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm9949Q8C9F4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm9949Q8C9F4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm9949Q8C9F4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Gm9949Q8C9F4 Gm11599-201ENSMUST00000118720 878 ntBASIC17.98■□□□□ 0.47
Gm9949Q8C9F4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm9949Q8C9F4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm9949Q8C9F4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm9949Q8C9F4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm9949Q8C9F4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm9949Q8C9F4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm9949Q8C9F4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm9949Q8C9F4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm9949Q8C9F4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Gm9949Q8C9F4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms