Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc187Q8C5V8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ccdc187Q8C5V8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ccdc187Q8C5V8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ccdc187Q8C5V8 Gm14523-201ENSMUST00000117260 558 ntBASIC23.46■■□□□ 1.35
Ccdc187Q8C5V8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ccdc187Q8C5V8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.46■■□□□ 1.35
Ccdc187Q8C5V8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ccdc187Q8C5V8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ccdc187Q8C5V8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.46■■□□□ 1.35
Ccdc187Q8C5V8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ccdc187Q8C5V8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ccdc187Q8C5V8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ccdc187Q8C5V8 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.46■■□□□ 1.35
Ccdc187Q8C5V8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ccdc187Q8C5V8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ccdc187Q8C5V8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ccdc187Q8C5V8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ccdc187Q8C5V8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ccdc187Q8C5V8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.43■■□□□ 1.34
Ccdc187Q8C5V8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.43■■□□□ 1.34
Ccdc187Q8C5V8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ccdc187Q8C5V8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ccdc187Q8C5V8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ccdc187Q8C5V8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ccdc187Q8C5V8 Terc-201ENSMUST00000082862 423 ntBASIC23.42■■□□□ 1.34
Ccdc187Q8C5V8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.42■■□□□ 1.34
Ccdc187Q8C5V8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.41■■□□□ 1.34
Ccdc187Q8C5V8 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.41■■□□□ 1.34
Ccdc187Q8C5V8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ccdc187Q8C5V8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ccdc187Q8C5V8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.39■■□□□ 1.33
Ccdc187Q8C5V8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ccdc187Q8C5V8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc187Q8C5V8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc187Q8C5V8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Ccdc187Q8C5V8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ccdc187Q8C5V8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.37■■□□□ 1.33
Ccdc187Q8C5V8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Ccdc187Q8C5V8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ccdc187Q8C5V8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Ccdc187Q8C5V8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Ccdc187Q8C5V8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc187Q8C5V8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.36■■□□□ 1.33
Ccdc187Q8C5V8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Ccdc187Q8C5V8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc187Q8C5V8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc187Q8C5V8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc187Q8C5V8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.34■■□□□ 1.33
Ccdc187Q8C5V8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc187Q8C5V8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc187Q8C5V8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc187Q8C5V8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ccdc187Q8C5V8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc187Q8C5V8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.32■■□□□ 1.32
Ccdc187Q8C5V8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Ccdc187Q8C5V8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc187Q8C5V8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
Ccdc187Q8C5V8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Ccdc187Q8C5V8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc187Q8C5V8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc187Q8C5V8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc187Q8C5V8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.31■■□□□ 1.32
Ccdc187Q8C5V8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.31■■□□□ 1.32
Ccdc187Q8C5V8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc187Q8C5V8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc187Q8C5V8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.29■■□□□ 1.32
Ccdc187Q8C5V8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc187Q8C5V8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.29■■□□□ 1.32
Ccdc187Q8C5V8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc187Q8C5V8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc187Q8C5V8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc187Q8C5V8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.27■■□□□ 1.32
Ccdc187Q8C5V8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc187Q8C5V8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc187Q8C5V8 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.26■■□□□ 1.31
Ccdc187Q8C5V8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.26■■□□□ 1.31
Ccdc187Q8C5V8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc187Q8C5V8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ccdc187Q8C5V8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc187Q8C5V8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ccdc187Q8C5V8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc187Q8C5V8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.25■■□□□ 1.31
Ccdc187Q8C5V8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ccdc187Q8C5V8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc187Q8C5V8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc187Q8C5V8 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.24■■□□□ 1.31
Ccdc187Q8C5V8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc187Q8C5V8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ccdc187Q8C5V8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc187Q8C5V8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ccdc187Q8C5V8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.23■■□□□ 1.31
Ccdc187Q8C5V8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ccdc187Q8C5V8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.22■■□□□ 1.31
Ccdc187Q8C5V8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc187Q8C5V8 Gm10420-201ENSMUST00000121713 882 ntBASIC23.21■■□□□ 1.31
Ccdc187Q8C5V8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ccdc187Q8C5V8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Ccdc187Q8C5V8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc187Q8C5V8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms