Protein–RNA interactions for Protein: Q8BPK2

Zcchc3, Zinc finger, CCHC domain-containing 3, mousemouse

Known RBP Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc3Q8BPK2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Zcchc3Q8BPK2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.51■■□□□ 1.03
Zcchc3Q8BPK2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Zcchc3Q8BPK2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Zcchc3Q8BPK2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.51■■□□□ 1.03
Zcchc3Q8BPK2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Zcchc3Q8BPK2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zcchc3Q8BPK2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zcchc3Q8BPK2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Zcchc3Q8BPK2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zcchc3Q8BPK2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Zcchc3Q8BPK2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zcchc3Q8BPK2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zcchc3Q8BPK2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zcchc3Q8BPK2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Zcchc3Q8BPK2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.48■■□□□ 1.03
Zcchc3Q8BPK2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.48■■□□□ 1.03
Zcchc3Q8BPK2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zcchc3Q8BPK2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Zcchc3Q8BPK2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zcchc3Q8BPK2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Zcchc3Q8BPK2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.47■■□□□ 1.03
Zcchc3Q8BPK2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zcchc3Q8BPK2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Zcchc3Q8BPK2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zcchc3Q8BPK2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zcchc3Q8BPK2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zcchc3Q8BPK2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Zcchc3Q8BPK2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Zcchc3Q8BPK2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.46■■□□□ 1.03
Zcchc3Q8BPK2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Zcchc3Q8BPK2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Zcchc3Q8BPK2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
Zcchc3Q8BPK2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zcchc3Q8BPK2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc3Q8BPK2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc3Q8BPK2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc3Q8BPK2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc3Q8BPK2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zcchc3Q8BPK2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zcchc3Q8BPK2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zcchc3Q8BPK2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Zcchc3Q8BPK2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zcchc3Q8BPK2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zcchc3Q8BPK2 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.42■■□□□ 1.02
Zcchc3Q8BPK2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Zcchc3Q8BPK2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Zcchc3Q8BPK2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Zcchc3Q8BPK2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Zcchc3Q8BPK2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zcchc3Q8BPK2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zcchc3Q8BPK2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Zcchc3Q8BPK2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.4■■□□□ 1.02
Zcchc3Q8BPK2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.4■■□□□ 1.02
Zcchc3Q8BPK2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Zcchc3Q8BPK2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zcchc3Q8BPK2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zcchc3Q8BPK2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zcchc3Q8BPK2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.39■■□□□ 1.01
Zcchc3Q8BPK2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
Zcchc3Q8BPK2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zcchc3Q8BPK2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zcchc3Q8BPK2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zcchc3Q8BPK2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Zcchc3Q8BPK2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Zcchc3Q8BPK2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zcchc3Q8BPK2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Zcchc3Q8BPK2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zcchc3Q8BPK2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Zcchc3Q8BPK2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zcchc3Q8BPK2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zcchc3Q8BPK2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Zcchc3Q8BPK2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Zcchc3Q8BPK2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.36■■□□□ 1.01
Zcchc3Q8BPK2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zcchc3Q8BPK2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Zcchc3Q8BPK2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zcchc3Q8BPK2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zcchc3Q8BPK2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zcchc3Q8BPK2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zcchc3Q8BPK2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zcchc3Q8BPK2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zcchc3Q8BPK2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Zcchc3Q8BPK2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Zcchc3Q8BPK2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zcchc3Q8BPK2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zcchc3Q8BPK2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zcchc3Q8BPK2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zcchc3Q8BPK2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zcchc3Q8BPK2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
Zcchc3Q8BPK2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Zcchc3Q8BPK2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.32■■□□□ 1
Zcchc3Q8BPK2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zcchc3Q8BPK2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zcchc3Q8BPK2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.32■■□□□ 1
Zcchc3Q8BPK2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zcchc3Q8BPK2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zcchc3Q8BPK2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zcchc3Q8BPK2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.3■■□□□ 1
Zcchc3Q8BPK2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 208.8 ms